added multistage dockerfile to run tests in actions and deploy to pypi

.env.dist

@@ -0,0 +1 @@
+ENV=

.gitignore

@@ -251,4 +251,6 @@ dmypy.json
 # Pyre type checker
 .pyre/
 
-# End of https://www.gitignore.io/api/python,pycharm,jetbrains
+# End of https://www.gitignore.io/api/python,pycharm,jetbrains
+
+.env

Dockerfile

@@ -0,0 +1,38 @@
+FROM condaforge/mambaforge:24.3.0-0 as conda
+
+COPY bandit-agents-dev-env-linux-64.lock lib/bandit-agents-dev-env-linux-64.lock
+
+COPY build_env.sh /lib/build_env.sh
+
+RUN chmod +x /lib/build_env.sh
+
+ENV ENV="BUILD"
+
+RUN ./lib/build_env.sh
+
+FROM debian:stable-slim as unit-test-image
+
+COPY --from=conda /env /env
+
+ENV ENV="TEST"
+
+COPY BanditAgents /lib/BanditAgents
+COPY Tests /lib/Tests
+COPY tox.ini /lib/tox.ini
+
+WORKDIR /lib
+
+CMD ["/env/bin/python3", "-m", "tox", "--current-env"]
+
+FROM debian:stable-slim as publish-lib-image
+
+RUN apt-get -y update; apt-get -y install curl
+
+COPY --from=conda /env /env
+
+ARG ENV
+ENV ENV=$ENV
+
+WORKDIR /lib
+
+ENTRYPOINT ["/app/launch_server.sh"]

Tests/BanditAgents/src/solvers/test_weight_solver.py

@@ -1,4 +1,4 @@
-from typing import Generator, Iterable, List
+from typing import Iterable, List
 import unittest
 from unittest.mock import patch
 
@@ -38,7 +38,7 @@ def make_mock_base_solver(action_keys: Iterable[actionKey]) -> BaseSolver:
     return BaseSolverBuilder().with_action_keys(action_keys).build()
 
 
-def mock__steps(x: ndarray[int], y: ndarray[float]) -> Generator[bool]:
+def mock__steps(x: ndarray[int], y: ndarray[float]) -> Iterable[bool]:
     return (True for _ in x)
 
 

bandit-agents-dev-env-linux-64.lock

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 2e1d5b848aca3965630c49dd7f3377094a30ca3b18aaedee74ba7ed4147c1afd
+# input_hash: 34b6a0f01ee56af448af8ff240e9dc28dc0f036c439c9129d764a9705b81498b
 @EXPLICIT
 https://repo.anaconda.com/pkgs/main/linux-64/_libgcc_mutex-0.1-main.conda#c3473ff8bdb3d124ed5ff11ec380d6f9
 https://repo.anaconda.com/pkgs/main/linux-64/blas-1.0-mkl.conda#9a7a051e9bd41da46523acb017d8a517
@@ -31,29 +31,37 @@ https://repo.anaconda.com/pkgs/main/linux-64/sqlite-3.45.3-h5eee18b_0.conda#acf9
 https://repo.anaconda.com/pkgs/main/linux-64/python-3.12.0-h996f2a0_0.conda#9bfdaa3ac3249dc0b8f9f22227f0ba07
 https://repo.anaconda.com/pkgs/main/linux-64/cfgv-3.4.0-py312h06a4308_0.conda#765ea9eb7e1f5cd3791fcbae54fc6a8f
 https://repo.anaconda.com/pkgs/main/linux-64/click-8.1.7-py312h06a4308_0.conda#a0d97fc547780b4ddefc91139e633e02
+https://repo.anaconda.com/pkgs/main/linux-64/colorama-0.4.6-py312h06a4308_0.conda#6175699c700cc4e4bf18ffc86778e488
 https://repo.anaconda.com/pkgs/main/linux-64/distlib-0.3.8-py312h06a4308_0.conda#3763a64961ca016ccf828044029cc5c0
 https://repo.anaconda.com/pkgs/main/linux-64/filelock-3.13.1-py312h06a4308_0.conda#6a0b440821945eda176c2bd78fd64a56
 https://repo.anaconda.com/pkgs/main/linux-64/mkl-service-2.4.0-py312h5eee18b_2.conda#4c74c6d49097f7bba2cd219e0c759048
 https://repo.anaconda.com/pkgs/main/linux-64/mypy_extensions-1.0.0-py312h06a4308_0.conda#79bbb864c9fffd761fbc7f5bc149dcef
 https://repo.anaconda.com/pkgs/main/linux-64/packaging-24.2-py312h06a4308_0.conda#cece1340aae4560340b6f061cd3bae2f
 https://repo.anaconda.com/pkgs/main/linux-64/pathspec-0.10.3-py312h06a4308_0.conda#adca67c357ada01d137d476d8c2d7f41
 https://repo.anaconda.com/pkgs/main/linux-64/platformdirs-3.10.0-py312h06a4308_0.conda#39dc9eb538e73250dadcdec7a8ed6595
+https://repo.anaconda.com/pkgs/main/linux-64/pluggy-1.5.0-py312h06a4308_0.conda#1287a7b660a041fbbb8931defb9111d6
+https://repo.anaconda.com/pkgs/main/noarch/py-1.11.0-pyhd3eb1b0_0.conda#7205a898ed2abbf6e9b903dff6abe08e
 https://repo.anaconda.com/pkgs/main/noarch/pycparser-2.21-pyhd3eb1b0_0.conda#135a72ff2a31150a3a3ff0b1edd41ca9
 https://repo.anaconda.com/pkgs/main/noarch/python-tzdata-2023.3-pyhd3eb1b0_0.conda#479c037de0186d114b9911158427624e
 https://repo.anaconda.com/pkgs/main/linux-64/pytz-2024.1-py312h06a4308_0.conda#f8a72213ea02624e802216fedff222e1
 https://repo.anaconda.com/pkgs/main/linux-64/pyyaml-6.0.2-py312h5eee18b_0.conda#757daf8bab7a35c165f3dc6c9355ea9b
 https://repo.anaconda.com/pkgs/main/linux-64/setuptools-72.1.0-py312h06a4308_0.conda#bab64ac5186aa07014788baf1fbe3ca9
 https://repo.anaconda.com/pkgs/main/noarch/six-1.16.0-pyhd3eb1b0_1.conda#34586824d411d36af2fa40e799c172d0
+https://repo.anaconda.com/pkgs/main/linux-64/tomli-2.0.1-py312h06a4308_1.conda#8770c279821e6ba382d5fa7562a8391b
 https://repo.anaconda.com/pkgs/main/linux-64/wheel-0.44.0-py312h06a4308_0.conda#6d495438dd44e8f16b1a05d0a8648644
+https://repo.anaconda.com/pkgs/main/linux-64/zipp-3.21.0-py312h06a4308_0.conda#b3ad8cca3dcd963260b5f84401cfc6ae
 https://repo.anaconda.com/pkgs/main/linux-64/black-24.8.0-py312h06a4308_0.conda#45db94c5c4cc7ec895f3620198365987
 https://repo.anaconda.com/pkgs/main/linux-64/cffi-1.17.1-py312h1fdaa30_1.conda#e3c5735b1a5c0ec929f62407410890bb
+https://repo.anaconda.com/pkgs/main/linux-64/importlib-metadata-8.5.0-py312h06a4308_0.conda#c7395d8d9fc78756d72104f0e9d468f5
 https://repo.anaconda.com/pkgs/main/linux-64/nodeenv-1.7.0-py312h06a4308_0.conda#23c0441e6b4e88642027f364e62f8566
 https://repo.anaconda.com/pkgs/main/linux-64/numpy-base-2.2.1-py312h0da6c21_0.conda#6ec469e931f2d1f7f08494b1d5668cc5
 https://repo.anaconda.com/pkgs/main/linux-64/pip-24.2-py312h06a4308_0.conda#798cbea8112672434d0cd7551f8fc4b9
 https://repo.anaconda.com/pkgs/main/linux-64/python-dateutil-2.9.0post0-py312h06a4308_2.conda#06c8706a892aaaae74325c0b46c86d01
 https://repo.anaconda.com/pkgs/main/linux-64/virtualenv-20.28.0-py312h06a4308_0.conda#f3843ea4e7a86a4fc2429cb0a25277a2
+https://conda.anaconda.org/conda-forge/noarch/tox-3.27.1-pyhd8ed1ab_0.tar.bz2#62b743e1030b17163c70654601afb60d
 https://repo.anaconda.com/pkgs/main/linux-64/ukkonen-1.0.1-py312hdb19cb5_1.conda#bbeaa2aff1b32149b4380d5cd80b4b25
 https://repo.anaconda.com/pkgs/main/linux-64/identify-2.5.5-py312h06a4308_0.conda#f41d506d423ed77f2fd4ae67020ae659
+https://conda.anaconda.org/conda-forge/noarch/tox-current-env-0.0.11-pyhd8ed1ab_0.conda#ca5420198ae4fe23bc4fe924be99635c
 https://repo.anaconda.com/pkgs/main/linux-64/pre-commit-3.4.0-py312h06a4308_1.conda#8570303eeae34305d21b118782de1834
 https://repo.anaconda.com/pkgs/main/linux-64/bottleneck-1.4.2-py312ha883a20_0.conda#ff0a95c8810f5c091da3d93e565c7763
 https://repo.anaconda.com/pkgs/main/linux-64/mkl_fft-1.3.11-py312h5eee18b_0.conda#8e39abc21446208f8efa84140549e137

bandit_agents_dev_env.yml

@@ -9,6 +9,8 @@ dependencies:
   - scipy
   - pandas
   - black
+  - tox
+  - tox-current-env
 
 platforms:
   - linux-64

build_env.sh

@@ -1,10 +1,46 @@
 #!/bin/sh +x
-if [ -e $CONDA_PREFIX_1/envs/bandit_agents_dev_env ]; then
+
+if [ $ENV = "BUILD" ]; then
+  mamba create \
+    --copy -p ./env \
+    --file /lib/bandit-agents-dev-env-linux-64.lock \
+    && conda clean -afy
+
+  find -name '*.a' -delete &&
+    rm -rf /env/conda-meta &&
+    rm -rf /env/include &&
+    rm /env/lib/libpython3.12.so.1.0 &&
+    find -name '__pycache__' -type d -exec rm -rf '{}' '+' &&
+    rm -rf /env/lib/python3.12/site-packages/pip /env/lib/python3.12/idlelib /env/lib/python3.12/ensurepip \
+      /env/lib/libasan.so.5.0.0 \
+      /env/lib/libtsan.so.0.0.0 \
+      /env/lib/liblsan.so.0.0.0 \
+      /env/lib/libubsan.so.1.0.0 \
+      /env/bin/x86_64-conda-linux-gnu-ld \
+      /env/bin/sqlite3 \
+      /env/bin/openssl \
+      /env/share/terminfo &&
+    find /env/lib/python3.12/site-packages/scipy -name 'tests' -type d -exec rm -rf '{}' '+' &&
+    find /env/lib/python3.12/site-packages/numpy -name 'tests' -type d -exec rm -rf '{}' '+' &&
+    find /env/lib/python3.12/site-packages/pandas -name 'tests' -type d -exec rm -rf '{}' '+' &&
+    find /env/lib/python3.12/site-packages -name '*.pyx' -delete &&
+    rm -rf /env/lib/python3.12/site-packages/uvloop/loop.c
+
+else
+  if [ -e $CONDA_PREFIX_1/envs/bandit_agents_dev_env ]; then
     echo erase bandit_agents_dev_env
     rm -r $CONDA_PREFIX_1/envs/bandit_agents_dev_env
-fi
+  fi
 
-echo creating environment
-conda create \
+  echo creating environment
+  conda create \
     --name bandit_agents_dev_env \
     --file bandit-agents-dev-env-linux-64.lock -y
+
+  echo adding dev dependencies
+  conda update \
+    --name bandit_agents_dev_env \
+    --freeze-installed \
+    --no-update-deps \
+    --file bandit-agents-dev-env-linux-64.lock
+fi

docker-compose.yml

@@ -0,0 +1,14 @@
+services:
+  mb-assistant-v2:
+    build:
+      context: .
+      dockerfile: Dockerfile
+      target: publish-lib-image
+      args:
+        ENV: $ENV
+
+  unit-tests:
+    build:
+      context: .
+      dockerfile: Dockerfile
+      target: unit-test-image

tox.ini

@@ -0,0 +1,19 @@
+[flake8]
+max-line-length = 300
+inline-quotes = single
+literal-inline-quotes = single
+exclude =
+    .git,
+    __pycache__,
+    old,
+    build,
+    dist,
+    env,
+    env_files,
+    deployment
+
+extend-ignore = E203, E704, F541
+
+
+[testenv]
+commands = /env/bin/python3 -m unittest