The Jupyter Notebooks in this directory are for development and testing of the results figures generation modules of the Salish Sea model nowcast system.

The links below are to static renderings of the notebooks via nbviewer.jupyter.org. Descriptions under the links below are from the first cell of the notebooks (if that cell contains Markdown or raw text).

• ##PlotNonDimVsMetricsShelfBox.ipynb

• ##VerticalVelocitiesComparisonNoCvsCNT.ipynb

• ##DiagnosticsFluxThroughBoxesNoCanyon-Copy1.ipynb

• ##BottomBandsCompare315m-6TrLinProfilesRun01Run02.ipynb

• ##FluxThroughPeriodicBoundaries.ipynb

• ##AnimMITgcm.ipynb

• ##CrossShelfTransports-NOGMREDI-DiscrepancyFix.ipynb

• ##ConcentrationGradientsDownstreamShelfBARKLEY.ipynb

• ##StratificationEvolution.ipynb

• ##ShelfBoxTransport-3DDIFF-CONT.ipynb

• ##CalcNumDiffMITgcmGlob.ipynb

• ##Plot_MetricsVsNonDim_CanyonEffect.ipynb

• ##WriteTotalTrOnShelf.ipynb

• ##NumDiffSensitivityTestnoTaveRun05.ipynb

• ##MassConservationTracerExperiments.ipynb

• ##NoCanyonCase_Analysis.ipynb

• ##DiffusiveTransportsUniformKv.ipynb

• ##FirstLookAtZonalFluxOutput.ipynb

• ##Ariane_CNTrun03_372part.ipynb

• ##VerticalVelocitiesComparisonCNTonly.ipynb

• ##Shelf_slope_and_vertical_transport.ipynb

• ##CanyonBox_08Feb2016.ipynb

• ##ShelfDefinition.ipynb

• ##VelocitiesDevelopedWhenChangingViscosityConfig.ipynb

• ##Plot_N_NonDim_VsMetricsCanyonBox.ipynb

• ##TracerMass_and_HCW_xarray.ipynb

• ##NumDiffSensitivityTestnoTaveRun02.ipynb

• ##FixWaterOnHole.ipynb

• ##Plot_N_NonDim_VsMetricsWholeShelf.ipynb

• ##ShelfBoxFluxes-CNTDIFF.ipynb

• ##TracerMass_and_HCW_xarray_new_viscosity.ipynb

• ##AngleCorrectionFluxesAcrossSB.ipynb

• ##BottomBandsCompare705m-1TrLinProfilesRun07Run08.ipynb

• ##NumDiffSensitivityTestnoTaveRun02_TandS.ipynb

• ##GMREDIrun01bis-whyNaNs.ipynb

• ##BottomBandsCompare705m-6TrLinProfilesRun01Run02.ipynb

• ##GMREDIrun02.ipynb

• ##CrossShelfTransport_DiffEffect_04Feb2016.ipynb

• ##TotalTracerOnShelfBarkleyProfilesNoCanyon.ipynb

• ##TotalTracerOnShelfCases-TracerExpBadge.ipynb

• ##ContoursAllRunsBottomConcentration.ipynb

• ##BathymetryFigure.ipynb

• ##Ariane_CNTrun29_10part.ipynb

• ##TotalDensityOnShelf.ipynb

• ##VerticalVelocitiesComparison3DvsCNT.ipynb

• ##NumDiffSensitivityTestnoTaveRun06.ipynb

• ##NoCanyonCases.ipynb

• ##TracerProfileEvolution.ipynb

• ##FluxThroughBoundaries.ipynb

• ##BottomBandsCompare1000m-6TrLinProfilesRun01Run02.ipynb

• ##SurfaceLayerAndCoastalUpwelling.ipynb

• ##Area_Volume_Domain.ipynb

• ##MeridionalComparisonTracTransVel-Copy2.ipynb

• ##VerticalFluxSurfaces.ipynb

• ##DensityTracking3DKzDiff.ipynb

• ##TotalTracerOnShelfBarkleyProfiles.ipynb

• ##Untitled.ipynb

• ##MITgcm_NetCDFOutput.ipynb

• ##JetHunt-Copy0.ipynb

• ##ColorMaps_MITgcm.ipynb

• ##MeridionalComparisonTracTransVel.ipynb

• ##CSVelPlots.ipynb

• ##isopycnalSurfaces3DDIFFrun04.ipynb

• ##CrossShelfFluxBoxes.ipynb

• ##CalcNumDiffMITgcmGlobVectorize.ipynb

• ##PlotIsosurfaces.ipynb

• ##ShelfBoxTransport-3DDIFF.ipynb

• ##VelocitiesDevelopedWhenChangingDiffusivityConfig.ipynb

• ##TracerGradientEvolution.ipynb

• ##CrossShelfTransports-NOGMREDI-BdyEffects.ipynb

• ##EffectOfProfileOnNoCanyonCase.ipynb

• ##TotalTracerOnShelfBARKLEY_Hole_NoCMask.ipynb

• ##BottomBandsCompare162m.ipynb

• ##CalcNumDiffMITgcmRUN05.ipynb

• ##NumDiffSensitivityTestnoTaveRun07_TandS.ipynb

• ##TotalTracerOnShelfCases-TracerExpBadge-Depth195m.ipynb

• ##ShelfBoxFluxes-3DDIFF-AlongShore.ipynb

• ##FluxThroughShelfBreakModule-BathyQuad.ipynb

• ##Plot_MetricsVsNonDim_WithStratFit.ipynb

• ##AdvectiveTransportsUniformKv.ipynb

• ##BottomBandsCompare315m-6TrLinProfilesRun07Run08.ipynb

• ##MeridionalComparisonTracTransVel-Copy1.ipynb

• ##GMREDIHydRun13.ipynb

• ##UpwellingDepthFromMaxValue.ipynb

• ##TotalTSOnShelfCases.ipynb

• ##GMREDIrun01-whyNaNs.ipynb

• ##CrossShelfTransport_CanyonEffect_03Feb2016.ipynb

• ##Body_forcing_paper2.ipynb

• ##FlowDescriptionCalculations.ipynb

• ##FluxThroughShelfBreakModule.ipynb

• ##2BarkleyCanyonsUpwelling.ipynb

• ##ConcentrationGradientsDownstreamShelf.ipynb

• ##TransportThroughBoxes.ipynb

• ##TotalTracerOnShelfCasesMaskTrick-TracerExpBadge.ipynb

• ##TotalTracerOnShelfBARKLEY_Hole-Copy1.ipynb

• ##NumDiffSensitivityTestnoTaveRun03.ipynb

• ##CalcNumDiffMITgcm.ipynb

• ##CalcNumDiffwrong.ipynb

• ##Hyd_vs_NonHyd.ipynb

• ##Jessicas_Run01.ipynb

• ##ConcentrationGradientsDownstreamShelfNandfVariations.ipynb

• ##BottomBoundaryLayers_ViscosityValues.ipynb

• ##BottomConcentration3Dplots.ipynb

• ##NumDiffSensitivityTestGMREDIHydRun01.ipynb

• ##TotalTracerOnShelf.ipynb

• ##ALookAtEKE.ipynb

• ##FirstLookAtFluxOutput.ipynb

• ##WaterCSTransports.ipynb

• ##REDIHydVSNoREDIHyd.ipynb

• ##TotalTracerOnShelfBARKLEY.ipynb

• ##VerticalVelocitiesComparisonCNTKiso.ipynb

• ##CrossShelfTransports-CNTDIFF.ipynb

• ##BottomBandsCompare315m.ipynb

• ##CheckGMREDIruns.ipynb

• ##Exploring_Ariane_Output.ipynb

• ##Effect_of_viscAz_in_tracers.ipynb

• ##BottomBoundaryLayers.ipynb

• ##FluxThroughShelfBreak_3DDiff.ipynb

• ##isopycnalSurfaces3DDIFFrun05.ipynb

• ##CalcNumDiffMITgcmFunctions.ipynb

• ##Ariane_CNTrun03_372particles.ipynb

• ##NumDiffSensitivityTest.ipynb

• ##Run08notave.ipynb

• ##CrossShelfTransports-NOGMREDI-ReproduceCrossShelf.ipynb

• ##Plot_MetricsVsNonDim.ipynb

• ##TracerOnShelf_DiffEffect_04Feb2016.ipynb

• ##VariableDiffusivityRun01.ipynb

• ##GetVelUpwellingCurrent.ipynb

• ##Ariane_CNTrun03_10part.ipynb

• ##TotalTracerOnShelfCases.ipynb

• ##DiffusivityCalculationPlots.ipynb

• ##BottomBands.ipynb

• ##CSTransportPlots.ipynb

• ##BottomBandsCompare162m-6TrLinProfilesRun01Run02.ipynb

• ##ConcentrationSurfaces3DDIFF.ipynb

• ##TracerCSTransports.ipynb

• ##HorizontalDiffusivitySensitivityRun01.ipynb

• ##2BarkleyCanyonsDownwelling.ipynb

• ##PlotNonDimVsMetricsCanyonBox.ipynb

• ##TotalTracerAlongShelfCases.ipynb

• ##JetHunt.ipynb

• ##HCW_CSTransport.ipynb

• ##TempSurfaces.ipynb

• ##ConcentrationSurfacesPlotly.ipynb

• ##DiagnosticsFluxThroughBoxesNoCanyon.ipynb

• ##ShelfBoxFluxes-3DDIFF.ipynb

• ##BottomBandsCompare705m.ipynb

• ##ConcentrationGradientsDownstreamShelfKvVariations.ipynb

• ##NumDiffSensitivityTestnoTaveRun08_TandS.ipynb

• ##Ariane_CNTrun03_372part-UpCanyon.ipynb

• ##TotalTracerOnShelfCNTDIFF.ipynb

• ##TotalTracerOnShelfBARKLEY_Hole.ipynb

• ##GMREDIHydRun12.ipynb

• ##BottomBandsCompare705m-6TrLinProfilesRun04Run06.ipynb

• ##ConcentrationSurfaces.ipynb

• ##Run15NaNs.ipynb

• ##isopycnalSurfacesCNT.ipynb

• ##CS_Figures_PosterOSM16_13Feb16.ipynb

• ##GMREDINonHydrun01.ipynb

• ##DiagnosticsFluxThroughBoxes.ipynb

• ##FluxThroughOpenBoundaries.ipynb

• ##CrossShelfTransports-3DDIFF.ipynb

• ##NumDiffSensitivityTestGMREDIHydRun01_bis.ipynb

• ##TracerTransport_vs_WaterTransport.ipynb

• ##MoviesTracerDescription-Copy1.ipynb

• ##Jessicas_Run02.ipynb

• ##CrossShelfTransportGridComparison.ipynb

• ##CalcNumDiffMITgcmTemp.ipynb

• ##GMREDIHydRun11.ipynb

• ##ShelfBox_08Feb2016.ipynb

• ##EkmanLayerArrestTime.ipynb

• ##CrossShelfTransportComparisons.ipynb

• ##isopycnalSurfaces3DDIFFrun06.ipynb

• ##DepthOfUpwellingArianePlan.ipynb

• ##MITgcm_NetCDFOutput_YucatanUpw.ipynb

• ##GMREDIHydrun04and05-Copy1.ipynb

• ##MITgcm_NetCDFOutput_FollowTopBands.ipynb

• ##NumDiffSensitivityTestnoTaveRun01.ipynb

• ##VelocitiesDevelopedWhenChangingNfConfig.ipynb

• ##VariableDiffKzRun01.ipynb

• ##NumDiffSensitivityTestnoTaveRun04.ipynb

• ##TracerMass_metric_plots_new_viscosity.ipynb

• ##1BarkleyCanyon_KPP_GMREDI.ipynb

• ##GMREDIHydrun04and05.ipynb

• ##FluxThroughShelfBreak.ipynb

• ##isopycnalSurfaces3DDIFFrun07.ipynb

• ##NumDiffSensitivityTestnoTaveRun09_TandS.ipynb

• ##BottomBandsCompare162m-6TrLinProfilesRun07Run08.ipynb

• ##TempAnimRun08.ipynb

• ##TracerOnShelfandHole_DiffEffect_08Feb2016.ipynb

• ##ExternalForcing_BodyForcing.ipynb

##License

These notebooks and files are copyright 2013-2019 by the Salish Sea MEOPAR Project Contributors and The University of British Columbia.

They are licensed under the Apache License, Version 2.0. http://www.apache.org/licenses/LICENSE-2.0 Please see the LICENSE file for details of the license.