production action

.github/.wiki/README.md

@@ -0,0 +1 @@
+A store of materials needed for the wiki

.github/ISSUE_TEMPLATE/default.md

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+---
+name: Other
+about: Creating a general issue
+title: 'Add a descriptive summary here.'
+labels: ''
+assignees: ''
+
+---
+
+# General Issue
+
+Please provided a detailed outline of the problem, discussion or suggestion. 
+
+Make sure to provide the following where it might apply. 
+
+- [ ] Any relevant files or code snippets
+- [ ] Where this occurs

.github/workflows/new_issue_submission.yml

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+name: Process a new issue
+
+on:
+  issues:
+    types: [edited, labeled]
+    # opened
+
+jobs:
+
+  process_template:
+    runs-on: ubuntu-latest
+    permissions:
+          actions: write
+          checks: write
+          contents: write
+          deployments: write
+          id-token: write
+          issues: write
+          # discussions: write
+          packages: write
+          pages: write
+          pull-requests: write
+          repository-projects: write
+          # security-events: write
+          statuses: write
+
+
+
+
+    steps:
+
+      - name: Get a list of directories with updated files
+        id: install-cmipld
+        uses: WCRP-CMIP/CMIP-LD/actions/cmipld@main
+
+
+      - name: Checkout repository
+        uses: actions/checkout@v4
+
+
+      - name: Run Python script
+        id: run_python
+        env:
+          ISSUE_TITLE: ${{ github.event.issue.title }}
+          ISSUE_BODY: |
+              ${{ github.event.issue.body }}
+          # pipe should preseve newline properties for multilines
+          ISSUE_SUBMITTER: ${{ github.event.issue.user.login }}
+          ISSUE_NUMBER: ${{ github.event.issue.number }}
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+
+        run: |
+          new_element
+
+          
+

.github/workflows/publish2pages.yml

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+name: publish_to_pages
+on:
+  push:
+    branches:
+      - "main"
+      - "jsonld_IV"
+
+jobs:
+  push2production:
+    runs-on: ubuntu-latest
+    env:
+      API_KEY: ${{ secrets.API_KEY }}
+      GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+      BRANCH: ${{ github.ref_name }}
+    permissions:
+      actions: write
+      checks: write
+      contents: write
+      deployments: write
+      id-token: write
+      packages: write
+      pages: write
+      pull-requests: write
+      repository-projects: write
+      statuses: write
+    steps:
+
+
+      - name: Check out the repository
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0  # Fetch the complete commit history
+
+      - name: Set up Git
+        run: |
+          git config user.email "[email protected]"
+          git config user.name "Daniel Ellis"
+          git config credential.helper store
+          git config --global user.email "[email protected]"
+          git config --global user.name "Daniel Ellis"
+          git config --global push.default current
+          echo "GH_TOKEN=${{ secrets.GITHUB_TOKEN }}" >> $GITHUB_ENV
+        shell: bash
+
+      - name: create symbolic link without extension 
+        id: push_to_production
+        run: |
+
+          # Check if production branch exists; if not, create it
+          if ! git show-ref --verify --quiet refs/heads/production; then
+              git checkout -b production
+          else
+              git checkout production
+          fi
+
+          # Checkout the specified branch's data_descriptors directory
+          git checkout "${BRANCH}" -- data_descriptors
+
+          # Find all .json files and create symbolic links without the .json extension
+          find . -type f -name "*.json" -exec sh -c 'ln -s "$0" "${0%.json}"' {} \;
+
+          # Stage all changes, commit, and push to production branch
+          git add -A
+          git commit -m "production push"
+          git push --force origin production
+

.github/workflows/update-jsonld.yml

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+name: Update JSONLD
+on: 
+  push:
+    branches:
+      - '*' 
+      # - main  # Adjust this to your branch name if different
+jobs:
+  update-jsonld:
+    runs-on: ubuntu-latest  # Specify the machine type
+
+    steps:
+
+    - name: Get a list of directories with updated files
+      id: install-cmipld
+      uses: WCRP-CMIP/CMIP-LD/actions/cmipld@main
+
+    - name: Checkout Code
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 2
+
+    - name: Get a list of directories with updated files
+      id: updated-dirs
+      uses: WCRP-CMIP/CMIP-LD/actions/updated-dirs@main
+      with:
+        filter_dir: "JSONLD"
+
+    - name: Compile JSONLD files, generate an RDF network and update frames
+      id: jsonld
+      uses: WCRP-CMIP/CMIP-LD/actions/jsonld@main
+      with:
+        dirs: ${{ env.updated_dirs }}
+        frames: "$PWD/compiled/graph_data.json"
+
+
+    - name: Run Update Scripts
+      if: ${{ env.updated_dirs }}
+      id: run-all-files
+      uses: WCRP-CMIP/CMIP-LD/actions/run-all-files@main
+      with:
+        directory: "$PWD/JSONLD/scripts"
+        script: python
+        script_ext: .py
+
+
+    - name: generate CV
+      if: ${{ env.updated_dirs }}
+      id: generate_cv
+      run: |
+        if [[ "${{env.updated_dirs}}" == *"JSONLD"* ]]; then
+          gencv && git push origin HEAD
+        fi
+  
+    - name: Commit All
+      uses: WCRP-CMIP/CMIP-LD/actions/commit-all@main
+      with:
+        message: "Automated Content Update"
+
+    - name: Push Changes
+      run: |
+        git push 

data_descriptors/frequency/1hr.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "sampled hourly",
-    "id": "1hr.json",
+    "id": "1hr",
     "long_name": "1 Hourly Frequency",
     "name": "1hr",
     "type": "frequency",

data_descriptors/frequency/1hrcm.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "monthly-mean diurnal cycle resolving each day into 1-hour means",
-    "id": "1hrcm.json",
+    "id": "1hrcm",
     "long_name": "1 Hour Climatology Monthly",
     "name": "1hrCM",
     "type": "frequency",

data_descriptors/frequency/1hrpt.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "sampled hourly, at specified time point within an hour",
-    "id": "1hrpt.json",
+    "id": "1hrpt",
     "long_name": "1 Hour Point",
     "name": "1hrPt",
     "type": "frequency",

data_descriptors/frequency/3hr.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "3 hourly mean samples",
-    "id": "3hr.json",
+    "id": "3hr",
     "long_name": "3 Hourly Frequency",
     "name": "3hr",
     "type": "frequency",

data_descriptors/frequency/3hrpt.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "sampled 3 hourly, at specified time point within the time period",
-    "id": "3hrpt.json",
+    "id": "3hrpt",
     "long_name": "3 Hour Point",
     "name": "3hrPt",
     "type": "frequency",

data_descriptors/frequency/6hr.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "6 hourly mean samples",
-    "id": "6hr.json",
+    "id": "6hr",
     "long_name": "6 Hourly Frequency",
     "name": "6hr",
     "type": "frequency",

data_descriptors/frequency/6hrpt.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "sampled 6 hourly, at specified time point within the time period",
-    "id": "6hrpt.json",
+    "id": "6hrpt",
     "long_name": "6 Hour Point",
     "name": "6hrPt",
     "type": "frequency",

data_descriptors/frequency/_context.json

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+{
+    "@context": {
+        "@base": "https://WCRP-CMIP.github.io/WCRP-UNIVERSE/data_descriptors/frequency/",
+        "@vocab": "https://WCRP-CMIP.github.io/WCRP-UNIVERSE/data_descriptors/frequency/",
+        "id": "_context",
+        "type": "@type"
+    },
+    "@embed": "@always"
+}

data_descriptors/frequency/day.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "daily mean samples",
-    "id": "day.json",
+    "id": "day",
     "long_name": "Daily Frequency",
     "name": "day",
     "type": "frequency",

data_descriptors/frequency/dec.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "decadal mean samples",
-    "id": "dec.json",
+    "id": "dec",
     "long_name": "Decadal Frequency",
     "name": "dec",
     "type": "frequency",

data_descriptors/frequency/fx.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "fixed (time invariant) field",
-    "id": "fx.json",
+    "id": "fx",
     "long_name": "Fixed Frequency",
     "name": "fx",
     "type": "frequency",

data_descriptors/frequency/mon.json

@@ -1,7 +1,7 @@
 {
     "@context": "https://wcrp-cmip.github.io/WCRP-UNIVERSE/data_descriptors/frequency/_context",
     "description": "monthly mean samples",
-    "id": "mon.json",
+    "id": "mon",
     "long_name": "Monthly Frequency",
     "name": "mon",
     "type": "frequency",