Merge pull request #375 from bids-standard/rel/0.7.1

REL: 0.7.1

.zenodo.json

@@ -25,6 +25,11 @@
       "name": "Salo, Taylor",
       "orcid": "0000-0001-9813-3167"
     },
+    {
+      "affiliation": "Dartmouth College",
+      "name": "Halchenko, Yaroslav O.",
+      "orcid": "0000-0003-3456-2493"
+    },
     {
       "affiliation": "University of Texas at Austin",
       "name": "McNamara, Quinten"
@@ -34,11 +39,6 @@
       "name": "DeStasio, Krista",
       "orcid": "0000-0002-3959-9060"
     },
-    {
-      "affiliation": "Dartmouth College",
-      "name": "Halchenko, Yaroslav O.",
-      "orcid": "0000-0003-3456-2493"
-    },
     {
       "affiliation": "McGill University",
       "name": "Poline, Jean-Baptiste",
@@ -58,6 +58,11 @@
       "name": "Nielson, Dylan M.",
       "orcid": "0000-0003-4613-6643"
     },
+    {
+      "affiliation": "MRC Cognition and Brain Sciences Unit",
+      "name": "Carlin, Johan",
+      "orcid": "0000-0003-0933-1239"
+    },
     {
       "affiliation": "Montreal Neurological Institute and Hospital",
       "name": "Kiar, Gregory",
@@ -73,6 +78,11 @@
       "name": "DuPre, Elizabeth",
       "orcid": "0000-0003-1358-196X"
     },
+    {
+      "affiliation": "Psychoinformatics Lab, Institute of Psychology, Otto-von-Guericke University Magdeburg",
+      "name": "Wagner, Adina",
+      "orcid": "0000-0003-2917-3450"
+    },
     {
       "name": "Ivanov, Alexander"
     },
@@ -116,11 +126,6 @@
       "name": "Staden, Isla",
       "orcid": "0000-0002-0795-1154"
     },
-    {
-      "affiliation": "Psychoinformatics Lab, Institute of Psychology, Otto-von-Guericke University Magdeburg",
-      "name": "Wagner, Adina",
-      "orcid": "0000-0003-2917-3450"
-    },
     {
       "affiliation": "The University of Washington eScience Institute",
       "name": "Rokem, Ariel",
@@ -136,11 +141,6 @@
       "name": "Kleinschmidt, Dave F.",
       "orcid": "0000-0002-7442-2762"
     },
-    {
-      "affiliation": "MRC Cognition and Brain Sciences Unit",
-      "name": "Carlin, Johan",
-      "orcid": "0000-0003-0933-1239"
-    },
     {
       "affiliation": "NIMH IRP",
       "name": "Lee, John A.",
@@ -151,6 +151,11 @@
       "name": "Visconti di Oleggio Castello, Matteo",
       "orcid": "0000-0001-7931-5272"
     },
+    {
+      "affiliation": "The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland",
+      "name": "Notter, Michael Philipp",
+      "orcid": "0000-0002-5866-047X"
+    },
     {
       "affiliation": "Sainte-Anne Hospital Center, Universit\u00e9 Paris Descartes",
       "name": "Roca, Pauline",

CHANGELOG.md

@@ -1,6 +1,29 @@
 # Changelog
 
+## Version 0.7.1 (February 01, 2019)
+
+This is a bug fix release in the 0.7 series. The primary API change is improved
+handling of `Path` objects.
+
+* FIX: Path validation (#342)
+* FIX: Ensure consistent entities at all levels (#326)
+* FIX: Edge case where a resampled column was too-long-by-one (#365)
+* FIX: Use BIDS metadata for TR over nii header (#357)
+* FIX: Add check for `run_info` to be a list, pass `run_info` in correct position. (#353)
+* FIX: If `sampling_rate` is `'auto'`, set to first rate of `DenseRunVariables` (#351)
+* FIX: Get the absolute path of the test data directory (#347)
+* FIX: Update reports to be 0.7-compatible (#341)
+* ENH: Rename `sr` variable to more intuitive `interval` (#366)
+* ENH: Support `pathlib.Path` and other `str`-castable types (#307)
+* MNT: Updates link to derivative config file in notebook (#344)
+* MNT: Add bids-validator dependency (#363)
+* MNT: Require pandas >= 0.23.0 (#348)
+* MNT: Bump grabbit version (#338)
+* CI: Ignore OSX Python 3.5 failures (#372)
+* CI: Build with Python 3.7 on Travis, deploy on 3.6 (#337)
+
 ## Version 0.7.0 (January 10, 2019)
+
 This is a major, API-breaking release. It introduces a large number of new features, bug fixes, and improvements.
 
 API-BREAKING CHANGES:

tools/update_changes.sh

@@ -0,0 +1,35 @@
+#!/bin/bash
+#
+# Collects the pull-requests since the latest release and
+# aranges them in the CHANGES.txt file.
+#
+# This is a script to be run before releasing a new version.
+#
+# Usage /bin/bash update_changes.sh 1.0.1
+#
+# Adapted from https://github.com/nipy/nipype/blob/98beb0a/tools/update_changes.sh
+
+# Setting      # $ help set
+set -u         # Treat unset variables as an error when substituting.
+set -x         # Print command traces before executing command.
+
+CHANGES=CHANGELOG.md
+
+# Elaborate today's release header
+HEADER="## Version $1 ($(date '+%B %d, %Y'))"
+cat <<END > newchanges
+# Changelog
+
+## Version $1 ($(date '+%B %d, %Y'))
+
+END
+
+# Search for PRs since previous release
+git log --grep="Merge pull request" `git describe --tags --abbrev=0`..HEAD --pretty='format:* %b %s' | sed  's+Merge pull request \(\#[^\d]*\)\ from\ .*+(\1)+' >> newchanges
+
+# Append old changes
+tail -n+2 $CHANGES >> newchanges
+
+# Replace old CHANGES with new file
+mv newchanges $CHANGES
+