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Issues list

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#135 opened Jul 6, 2020 by bjclavijo
Add rle capability to long read datastores
#134 opened Jul 3, 2020 by bjclavijo
@bjclavijo
Kci to take kmer counter index as argument or somethign similar
#133 opened Jun 10, 2020 by gonzalogacc
segfault when making a workspace including a long read datastore
#129 opened May 29, 2020 by jonwright99
Possible overflow in ws.ls()
#128 opened May 28, 2020 by jonwright99
1
Unify all kmer generation from strings/char* in a KmerIterator class template
#126 opened May 27, 2020 by bjclavijo
@TransGirlCodes
GraphPatcher
#125 opened May 27, 2020 by bjclavijo
@bjclavijo
sdg-dbg allows kmer size>63
#124 opened May 7, 2020 by jonwright99
all datastores to return RC sequence when using negative read ids tidying up no (big) change in function, but making life simpler and more elegant
#123 opened May 5, 2020 by bjclavijo
check seqID_T is used everywhere to refer to read ids tidying up no (big) change in function, but making life simpler and more elegant
#122 opened May 5, 2020 by bjclavijo
support multiple files on datastore make
#120 opened Nov 12, 2019 by bjclavijo
Create a v1.0 release and pre-compiled binaries + lib
#103 opened Jul 12, 2019 by bjclavijo SDG v1.0
@TransGirlCodes @ljyanesm
3
review and create a set of coherent CLI tools only
#78 opened Jun 10, 2019 by bjclavijo SDG v1.0
@bjclavijo
create GFA output of a MLGD -> Anchor -> LDG -> Backbone -> consensus process
#68 opened Mar 28, 2019 by bjclavijo
Julia Wrapper (C++ Side)
#59 opened Nov 19, 2018 by TransGirlCodes
@TransGirlCodes
LinkedReadMapper::compute_all_tag_neighbours as default tag-space proximity
#41 opened Oct 18, 2018 by bjclavijo Lmp10x
@bjclavijo
Implement a sequence alignment tool (with no threading yet) enhancement
#40 opened Oct 17, 2018 by bjclavijo
@bjclavijo
1
Correct kmerPos and its use in indexes bug enhancement URGENT
#23 opened Sep 10, 2018 by bjclavijo
@bjclavijo @ljyanesm
1
reverse LMP libraries on datastore creation, plus set the flag anyway
#16 opened Sep 4, 2018 by bjclavijo Lmp10x
@bjclavijo
Update Logging of basic operations that modify the workspace status enhancement
#12 opened Sep 3, 2018 by bjclavijo
@bjclavijo
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