bump the docker image versions for the Terra notebooks (#470)

* bump the docker image versions for the Terra notebooks * typo fix
broadinstitute · Sep 29, 2021 · 1f07ac8 · 1f07ac8
1 parent c18ada2
commit 1f07ac8
Show file tree

Hide file tree

Showing 8 changed files with 9 additions and 9 deletions.
diff --git a/notebooks/mnist_survival_analysis_demo.ipynb b/notebooks/mnist_survival_analysis_demo.ipynb
@@ -23,7 +23,7 @@
     "## Setup\n",
     "\n",
     "<div class=\"alert alert-block alert-warning\">\n",
-    "    If you're running this notebook on Terra, use custom Docker image: <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>.</br>\n",
+    "    If you're running this notebook on Terra, use custom Docker image: <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>.</br>\n",
     "    This notebook will run fine on a CPU, but you can also run it on a <a href=https://support.terra.bio/hc/en-us/articles/4403006001947>GPU-enabled Cloud Environment</a> if you like.\n",
     "</div>"
    ]

diff --git a/notebooks/review_results/identify_a_sample_to_review.ipynb b/notebooks/review_results/identify_a_sample_to_review.ipynb
@@ -16,7 +16,7 @@
     "<div class=\"alert alert-block alert-warning\">\n",
     "    This notebook assumes:\n",
     "    <ul>\n",
-    "        <li><b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>.</li>\n",
+    "        <li><b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>.</li>\n",
     "        <li><b>ml4h</b> is running custom Docker image <kbd>gcr.io/broad-ml4cvd/deeplearning:tf2-latest-gpu</kbd>.</li>\n",
     "    </ul>\n",
     "</div>"

diff --git a/notebooks/review_results/image_annotations.ipynb b/notebooks/review_results/image_annotations.ipynb
@@ -18,7 +18,7 @@
     "<div class=\"alert alert-block alert-warning\">\n",
     "    This notebook assumes\n",
     "    <ul>\n",
-    "        <li><b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>.</li>\n",
+    "        <li><b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>.</li>\n",
     "        <li><b>ml4h</b> is running custom Docker image <kbd>gcr.io/broad-ml4cvd/deeplearning:tf2-latest-gpu</kbd>.</li>\n",
     "    </ul>\n",
     "</div>"

diff --git a/notebooks/review_results/review_one_sample.ipynb b/notebooks/review_results/review_one_sample.ipynb
@@ -16,7 +16,7 @@
     "<div class=\"alert alert-block alert-warning\">\n",
     "    This notebook assumes\n",
     "    <ul>\n",
-    "        <li><b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>.</li>\n",
+    "        <li><b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>.</li>\n",
     "        <li><b>ml4h</b> is running custom Docker image <kbd>gcr.io/broad-ml4cvd/deeplearning:tf2-latest-gpu</kbd>.</li>\n",
     "    </ul>\n",
     "</div>"

diff --git a/notebooks/review_results/test_error_handling_for_notebook_visualizations.ipynb b/notebooks/review_results/test_error_handling_for_notebook_visualizations.ipynb
@@ -21,7 +21,7 @@
    "metadata": {},
    "source": [
     "<div class=\"alert alert-block alert-warning\">\n",
-    "    <b>Terra Users</b> test with the most recent custom Docker image which has all the software dependencies preinstalled. (Currently: <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>)\n",
+    "    <b>Terra Users</b> test with the most recent custom Docker image which has all the software dependencies preinstalled. (Currently: <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>)\n",
     "</div>"
    ]
   },

diff --git a/notebooks/terra_featured_workspace/image_annotations_demo.ipynb b/notebooks/terra_featured_workspace/image_annotations_demo.ipynb
@@ -24,7 +24,7 @@
     "# Setup\n",
     "\n",
     "<div class=\"alert alert-block alert-warning\">\n",
-    "    This notebook assumes <b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>.\n",
+    "    This notebook assumes <b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>.\n",
     "</div>"
    ]
   },

diff --git a/notebooks/terra_featured_workspace/review_model_results_interactive.ipynb b/notebooks/terra_featured_workspace/review_model_results_interactive.ipynb
@@ -22,7 +22,7 @@
     "# Setup\n",
     "\n",
     "<div class=\"alert alert-block alert-warning\">\n",
-    "    This notebook assumes <b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>.\n",
+    "    This notebook assumes <b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>.\n",
     "</div>"
    ]
   },

diff --git a/notebooks/terra_featured_workspace/review_one_sample_interactive.ipynb b/notebooks/terra_featured_workspace/review_one_sample_interactive.ipynb
@@ -22,7 +22,7 @@
     "# Setup\n",
     "\n",
     "<div class=\"alert alert-block alert-warning\">\n",
-    "    This notebook assumes <b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210902_181409</kbd>.\n",
+    "    This notebook assumes <b>Terra</b> is running custom Docker image <kbd>ghcr.io/broadinstitute/ml4h/ml4h_terra:20210928_221837</kbd>.\n",
     "</div>"
    ]
   },
@@ -304,7 +304,7 @@
    "source": [
     "## View recent annotations\n",
     "\n",
-    "For the purposes of this demo we are storing and displaying only those annotations created within this session. The ml4h toolkit includes functionaltiy to also persist these annotations to durable storage."
+    "For the purposes of this demo we are storing and displaying only those annotations created within this session. The ml4h toolkit includes functionality to also persist these annotations to durable storage."
    ]
   },
   {