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Refactoring #41

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Refactoring #41

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marjanalbooyeh
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This PR updates a couple of things:

  • Separating mixing step from running steps in signac init. The reason for this change is to make it easier to repeat the run step during PT swaps.

  • Saving a gsd snapshot at the end of run instead of saving a .txt file.

  • Allow system to load from a snapshot if provided.

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LGTM!

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