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Moved maxquant spreadsheet down
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scootermorris committed Nov 16, 2023
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34 changes: 17 additions & 17 deletions presentations/modules/proteomics/module.html
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Expand Up @@ -86,6 +86,23 @@ <h2 style="font-size:80%">Protein Groups</h2>
<h1>Understanding Proteomics Results</h1>
</section>

<section>
<h1 style="font-size:120%">Understanding Proteomics Results</h1>
<p>Overview of analytical pipeline</p>
<div>
<img src="modules/proteomics/pipeline.jpg" >
</div>
<a style="font-size: large;" href="https://doi.org/10.3389/fmed.2021.747333">https://doi.org/10.3389/fmed.2021.747333</a>
</section>

<section>
<h1 style="font-size:120%">Understanding Proteomics Results</h1>
<p>Example dataset after identification and quantitation</p>
<div>
<img src="modules/proteomics/spreadsheet.png" title="add image here" >
</div>
</section>

<section>
<h1 style="font-size:120%">Understanding Proteomics Results</h1>
<h2 style="font-size:80%">MaxQuant proteinGroups.txt</h2>
Expand Down Expand Up @@ -120,23 +137,6 @@ <h2 style="font-size:80%">MaxQuant Columns</h2>
<p style="text-align:left; font-size: 80%">The last three columns are commonly used to filter out false positive hits.</p>
</section>

<section>
<h1 style="font-size:120%">Understanding Proteomics Results</h1>
<p>Overview of analytical pipeline</p>
<div>
<img src="modules/proteomics/pipeline.jpg" >
</div>
<a style="font-size: large;" href="https://doi.org/10.3389/fmed.2021.747333">https://doi.org/10.3389/fmed.2021.747333</a>
</section>

<section>
<h1 style="font-size:120%">Understanding Proteomics Results</h1>
<p>Example dataset after identification and quantitation</p>
<div>
<img src="modules/proteomics/spreadsheet.png" title="add image here" >
</div>
</section>

<section>
<h1 style="font-size:120%">Analyzing Proteomics Data</h1>
<p>R packages for proteomics analysis</p>
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