set timeout for job #35
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| name: Test PR | ||
| on: | ||
| pull_request: | ||
| types: [opened, synchronize, reopened] | ||
| push: | ||
| branches: | ||
| - develop | ||
| schedule: | ||
| - cron: "9 2 * * 0" # at 9:02 on sunday | ||
| env: | ||
| UV_SYSTEM_PYTHON: 1 | ||
| jobs: | ||
| timeout-minutes: 60 | ||
| quality: | ||
| uses: ecmwf-actions/reusable-workflows/.github/workflows/qa-precommit-run.yml@v2 | ||
| with: | ||
| skip-hooks: "no-commit-to-branch" | ||
| checks: | ||
| runs-on: ubuntu-latest | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| platform: ["ubuntu-latest", "macos-latest"] | ||
| python-version: ["3.9", "3.10", "3.11"] | ||
| install-mode: ${{ github.event_name == 'schedule' && '["all"]' || '["local-changes", "all"]' }} | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| with: | ||
| fetch-depth: 0 | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: astral-sh/setup-uv@v5 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| enable-cache: true | ||
| - name: Install test dependencies | ||
| run: | | ||
| uv pip install pytest pytest-md pytest-emoji | ||
| - name: Detect changed packages | ||
| id: changed-packages | ||
| run: | | ||
| if [ "${{ github.event_name }}" == "pull_request" ]; then | ||
| # For pull requests, compare with the PR base | ||
| MERGE_BASE=$(git merge-base origin/${{ github.event.pull_request.base.ref }} ${{ github.event.pull_request.head.sha }}) | ||
| CHANGED_FILES=$(git diff --name-only $MERGE_BASE...${{ github.event.pull_request.head.sha }}) | ||
| elif [ "${{ github.event_name }}" == "push" ]; then | ||
| # For pushes, compare with the previous commit | ||
| CHANGED_FILES=$(git diff --name-only HEAD^ HEAD) | ||
| else | ||
| # For scheduled runs, check all files | ||
| CHANGED_FILES=$(git ls-files '*.py') | ||
| fi | ||
| echo "Changed files:" | ||
| echo "$CHANGED_FILES" | ||
| echo "training_changed=$(echo "$CHANGED_FILES" | grep -q '^training/' && echo 'true' || echo 'false')" >> $GITHUB_OUTPUT | ||
| echo "graphs_changed=$(echo "$CHANGED_FILES" | grep -q '^graphs/' && echo 'true' || echo 'false')" >> $GITHUB_OUTPUT | ||
| echo "models_changed=$(echo "$CHANGED_FILES" | grep -q '^models/' && echo 'true' || echo 'false')" >> $GITHUB_OUTPUT | ||
| - name: Install packages | ||
| run: | | ||
| PACKAGES="" | ||
| if [[ ${{ matrix.install-mode }} == 'local-changes' ]]; then | ||
| # Install from local if changed, otherwise from PyPI | ||
| if [[ ${{ steps.changed-packages.outputs.training_changed }} == 'true' ]]; then | ||
| PACKAGES="$PACKAGES -e ./training[all,tests]" | ||
| else | ||
| PACKAGES="$PACKAGES anemoi-training[all,tests]" | ||
| fi | ||
| if [[ ${{ steps.changed-packages.outputs.graphs_changed }} == 'true' ]]; then | ||
| PACKAGES="$PACKAGES -e ./graphs[all,tests]" | ||
| else | ||
| PACKAGES="$PACKAGES anemoi-graphs[all,tests]" | ||
| fi | ||
| if [[ ${{ steps.changed-packages.outputs.models_changed }} == 'true' ]]; then | ||
| PACKAGES="$PACKAGES -e ./models[all,tests]" | ||
| else | ||
| PACKAGES="$PACKAGES anemoi-models[all,tests]" | ||
| fi | ||
| else | ||
| # Install all packages from local | ||
| PACKAGES="-e ./training[all,tests] -e ./graphs[all,tests] -e ./models[all,tests]" | ||
| fi | ||
| uv pip install $PACKAGES | ||
| - name: Run pytest for training package | ||
| if: matrix.install-mode == 'all' || steps.changed-packages.outputs.training_changed == 'true' | ||
| uses: pavelzw/pytest-action@v2 | ||
| with: | ||
| report-title: "Test report Anemoi Training (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)" | ||
| custom-pytest: pytest ./training | ||
| - name: Run pytest for graphs package | ||
| if: matrix.install-mode == 'all' || steps.changed-packages.outputs.graphs_changed == 'true' | ||
| uses: pavelzw/pytest-action@v2 | ||
| with: | ||
| report-title: "Test report Anemoi Graphs (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)" | ||
| custom-pytest: pytest ./graphs | ||
| - name: Run pytest for models package | ||
| if: matrix.install-mode == 'all' || steps.changed-packages.outputs.models_changed == 'true' | ||
| uses: pavelzw/pytest-action@v2 | ||
| with: | ||
| report-title: "Test report Anemoi Models (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)" | ||
| custom-pytest: pytest ./models | ||
| - name: Run integration tests | ||
| if: success() && (matrix.install-mode == 'all' || steps.changed-packages.outputs.training_changed == 'true' || steps.changed-packages.outputs.graphs_changed == 'true' || steps.changed-packages.outputs.models_changed == 'true') | ||
| uses: pavelzw/pytest-action@v2 | ||
| timeout-minutes: 30 | ||
| with: | ||
| report-title: "Test report Anemoi Core Integration (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)" | ||
| custom-pytest: pytest tests/ | ||
