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Jupyter notebooks#294

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ta440 wants to merge 78 commits intomainfiredrakeproject/gusto:mainfrom tim_FML_notebooksfiredrakeproject/gusto:tim_FML_notebooksCopy head branch name to clipboard

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Commits on Jul 19, 2022

• Adding the first introduction notebook

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• Jupyter notebook 2

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Commits on Jul 21, 2022

• Books 1 and 2 and sk_non-linear results

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• Notebook 3

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Commits on Jul 22, 2022

• Added book 4

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Commits on Aug 23, 2022

• updated otebooks 1-3

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• Added Paraview pictures

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• Remove old notebooks

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• Delete unwanted results

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• Updated book 4

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• Merge branch 'main' into tim_FML_notebooks

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• Notebook updates 23_8_22

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• Remove extra output files

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• Deleted extra results

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• Added a notebook test script

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Commits on Aug 24, 2022

• update github action to test the jupyter notebooks

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Commits on Aug 26, 2022

• Fixed failing notebook tests, updated CI, made tests DRYer

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Commits on Aug 29, 2022

• Merge pull request #297 from firedrakeproject/JDBetteridge/various_ci_fixes

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Commits on Aug 30, 2022

• Adding the notebooks to the lint checker

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• Made changes to notebook 1 and the names

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• updating from main

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Commits on Sep 1, 2022

• Fix output filename error in Book1

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Commits on Sep 2, 2022

• Update Makefile

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• Update setup.cfg

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Commits on Sep 5, 2022

• Lint changes in notebooks

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• Remove lint notebooks for now

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• remove notebook flake stuff for now

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• Merge branch 'main' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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Commits on Sep 6, 2022

• Merge branch 'tim_FML_notebooks' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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Commits on Sep 29, 2022

• Merge branch 'main' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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• Tom comment changes

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Commits on Oct 7, 2022

• Book 4 name change

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Commits on Nov 11, 2022

• Merge branch 'main' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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• can import pi from Firedrake

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Commits on Nov 12, 2022

• some clarifications to the first notebook

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• Merge branch 'main' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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• fix interface to SemiImplicitQuasiNewton

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• some changes to the second notebook

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• some changes to the second notebook

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• some changes to notebook 3

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• fix book 3 since changes to recovery options

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• remove old recovery code from notebook 3

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• changes to notebook 4

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Commits on Nov 16, 2022

• demonstrate how to use RK4 for shallow water

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• demonstrate how to use RK4 for shallow water

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Commits on Dec 2, 2022

• more changes

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Commits on Jan 23, 2023

• Merge branch 'main' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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• purge state from first notebook

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• missed parameters

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• urgh I hate version control with notebooks

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Commits on Jan 24, 2023

• add reference profiles

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Commits on Dec 16, 2024

• Merge branch 'main' into tim_FML_notebooks and fix conflicts

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Commits on Dec 17, 2024

• Add reset recipe

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• Silence commands

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• Enable notebook linting

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• begin upadting notebooks...

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• Merge branch 'tim_FML_notebooks' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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• Merge branch 'main' into tim_FML_notebooks

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Commits on Dec 18, 2024

• Merge branch 'main' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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• working jupyter notebooks for shallow water and vertical slice gravity wave

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• these two notebooks should now pass lint

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• third noteboko

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• updates to notebooks

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• Enable nbval-lax for pytesting notebooks

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• Re-run notebooks

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• loadscope is important

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• Lint

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• Cancels jobs running if new commits are pushed

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• more notebook updates

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• I think the first two notebooks are ok now

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Commits on Dec 19, 2024

• Add additional packages to testing

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• tiny changes to first 2 notebooks and bigger changes to the third

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• Merge branch 'main' into tim_FML_notebooks

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• more improvements to notebooks

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• Merge branch 'tim_FML_notebooks' of https://github.com/firedrakeproject/gusto into tim_FML_notebooks

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• Merge branch 'main' into tim_FML_notebooks

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Commits on Dec 20, 2024

• We don't really care about the logs generated by running the notebooks

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• Increase timeout for cells

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