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Pull requests: galaxyproject/tools-iuc

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312 Open 5,124 Closed
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Pull requests list

hicBuildMatrix SAM inputs changed from repeat to plain params
#6670 opened Jan 10, 2025 by pavanvidem Loading…
3 of 5 tasks
added squirrel MPXV analysis
#6666 opened Jan 9, 2025 by ammaraziz Loading…
3 of 5 tasks
23
Add data manager for clair3 models
#6659 opened Jan 7, 2025 by pvanheus Loading…
2 of 5 tasks
2
Updating tools/lineagespot from version 1.6.0 to 1.10.0
#6657 opened Jan 6, 2025 by gxydevbot Loading…
Updating tools/cemitool from version 1.26.0 to 1.30.0
#6656 opened Jan 6, 2025 by gxydevbot Loading…
Updating tools/infercnv from version 1.20.0 to 1.22.0
#6654 opened Dec 30, 2024 by gxydevbot Loading…
Updating tools/dexseq from version 1.48.0 to 1.52.0
#6653 opened Dec 30, 2024 by gxydevbot Loading…
Updating tools/annotatemyids from version 3.18.0 to 3.20.0
#6652 opened Dec 30, 2024 by gxydevbot Loading…
update pharokka to latest version
#6651 opened Dec 28, 2024 by bgruening Loading…
3 of 5 tasks
7
Updating tools/lastz from version 1.04.22 to 1.04.41
#6649 opened Dec 23, 2024 by gxydevbot Loading…
3
Add Fairy
#6647 opened Dec 20, 2024 by SantaMcCloud Loading…
3 of 5 tasks
46
Add deeparg
#6646 opened Dec 19, 2024 by hugolefeuvre Loading…
3 of 5 tasks
5
wrappers for ppanggolin all and ppanggolin msa
#6645 opened Dec 18, 2024 by thomas-lacroix Loading…
3 of 5 tasks
23
Update anndata - galaxy version 1
#6644 opened Dec 17, 2024 by nilchia Loading…
3 of 5 tasks
12
[EMBOSS] Add Needleall tool (v6) and bump version for needle to v6
#6643 opened Dec 16, 2024 by shiltemann Loading…
3 of 5 tasks
20
Fastp fixes
#6642 opened Dec 16, 2024 by bernt-matthias Loading…
3 of 5 tasks
1
Updating tools/umi_tools from version 1.1.5 to 1.1.6
#6639 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/tximport from version 1.30.0 to 1.34.0
#6638 opened Dec 16, 2024 by gxydevbot Loading…
1
Updating tools/pbmm2 from version 1.16.0 to 1.16.99
#6637 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/decontam from version 1.22.0 to 1.26.0
#6634 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/cutadapt from version 4.9 to 5.0
#6633 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/ancombc from version 1.4.0 to 2.8.0
#6632 opened Dec 16, 2024 by gxydevbot Loading…
volcanoplot bump
#6622 opened Dec 11, 2024 by bgruening Loading…
5 tasks
1
8
Sourmash wrapper
#6618 opened Dec 11, 2024 by renu-pal • Draft
4
Updating tools/microsatbed from version 1.3.3 to 1.4.1
#6616 opened Dec 9, 2024 by gxydevbot Loading…
1
ProTip! Updated in the last three days: updated:>2025-01-08.