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towards indexing Ion et al. 2024; related to globalbioticinteractions…
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41 changes: 41 additions & 0 deletions .github/workflows/review.yml
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# This workflow will review a GloBI indexed dataset.
# For more information see: https://globalbioticinteractions.org

name: GloBI review by Elton

on:
push:
branches: [ '*' ]
pull_request:
branches: [ '*' ]
schedule:
- cron: "0 0 * * 1"

jobs:
review:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up JDK 1.8
uses: actions/setup-java@v4
with:
distribution: 'temurin'
java-version: '8'
- name: download review script
run: curl --silent -L "https://raw.githubusercontent.com/globalbioticinteractions/globinizer/master/check-dataset.sh" > check-dataset.sh
- name: download network compiler script
run: |
curl --silent -L "https://raw.githubusercontent.com/globalbioticinteractions/globinizer/master/compile-network.sh" > compile-network.sh
chmod +x compile-network.sh
- name: review dataset
run: bash check-dataset.sh "${GITHUB_REPOSITORY}"
- name: Share review report
uses: actions/upload-artifact@v4
with:
name: review-report
path: |
README.txt
datasets/
index.*
indexed-*
review*
3 changes: 3 additions & 0 deletions .gitignore
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.elton/
add_travis_artifact_upload_keys.sh
datasets/
5 changes: 5 additions & 0 deletions README.md
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[![GloBI Review by Elton](../../actions/workflows/review.yml/badge.svg)](../../actions/workflows/review.yml) [![GloBI](https://api.globalbioticinteractions.org/interaction.svg?accordingTo=globi:globalbioticinteractions/ion2024&refutes=true&refutes=false)](https://globalbioticinteractions.org/?accordingTo=globi:globalbioticinteractions/ion2024)

Configuration to help Global Biotic Interactions (GloBI, https://globalbioticinteractions.org) index:

Ion MC, Bloomer CC, Bărăscu TI, Oficialdegui FJ, Shoobs NF, Williams BW, Scheers K, Clavero M, Grandjean F, Collas M, Baudry T, Loughman Z, Wright JJ, Ruokonen TJ, Chucholl C, Guareschi S, Koese B, Banyai ZM, Hodson J, Hurt M, Kaldre K, Lipták B, Fetzner JW, Cancellario T, Weiperth A, Birzaks J, Trichkova T, Todorov M, Balalaikins M, Griffin B, Petko ON, Acevedo-Alonso A, D’Elía G, Śliwińska K, Alekhnovich A, Choong H, South J, Whiterod N, Zorić K, Haase P, Soto I, Brady DJ, Haubrock PJ, Torres PJ, Şadrin D, Vlach P, Kaya C, Woo Jung S, Kim J, Vermeersch XHC, Bonk M, Guiaşu R, Harlioğlu MM, Devlin J, Kurtul I, Błońska D, Boets P, Masigol H, Cabe PR, Jussila J, Vrålstad T, Beresford DV, Reid SM, Patoka J, Strand DA, Tarkan AS, Steen F, Abeel T, Harwood M, Auer S, Kelly S, Giantsis IA, Maciaszek R, Alvanou MV, Aksu Ö, Hayes DM, Kawai T, Tricarico E, Chakandinakira A, Barnett ZC, Kudor ŞG, Beda AE, Vîlcea L, Mizeranschi AE, Neagul M, Licz A, Cotoarbă AD, Petrusek A, Kouba A, Taylor CA, Pârvulescu L. 2024. World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens. PeerJ 12:e18229 https://doi.org/10.7717/peerj.18229
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hash://sha256/ed9ba10d7d0c88df73295110a7f91356664f11498d97a2e44f05ec63251371c0
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preston head | preston cat | preston excel-stream | mlr --ijson --otsvlite cat
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hash://sha256/d3160b870a98c75e600e89e1d43369242089229046d79c7f6c1e65a6d3cf50af
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hash://sha256/d02f82ed4d411ded938303e82dae70d13d696932988536bb68108b39eae39aad
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