sync to web app v1.0.0.1; remove unecessary files

hariszaf · Aug 14, 2024 · 02bb704 · 02bb704
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Showing 10 changed files with 9 additions and 5,297 deletions.
diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md
diff --git a/Dockerfile b/Dockerfile
diff --git a/docker-compose.yml b/docker-compose.yml
diff --git a/docs/cytoApp.md b/docs/cytoApp.md
@@ -1,8 +1,8 @@
-<!-- ---
+---
 layout: default
 title: Cytoscape App Tutorial
 nav_order: 3
---- -->
+---
 
 # `microbetag` on Cytoscape
 

diff --git a/docs/mgg_tutorials/mgg_totorials.md b/docs/mgg_tutorials/mgg_totorials.md
@@ -1,8 +1,9 @@
 ---
-layout: default
+# layout: default
 title: Cytoscape tutorials
 nav_order: 3
 has_children: true
+version: latest
 permalink: /docs/mgg_tutorials
 usemath: true
 ---
@@ -13,14 +14,14 @@ usemath: true
 
 # Run `microbetag` Cytoscape app
 
-microbetag v1.0.0
+microbetag v1.0.1
 {: .label .label-green }
 
 MGG v1.0.0
 {: .label .label-green }
 
 
-[microbetag source code](https://github.com/msysbio/microbetagApp){: .btn .btn-green .fs-5 .mb-4 .mb-md-0 }
+[microbetag web-app](https://github.com/msysbio/microbetagApp-public/releases/tag/v1.0.1){: .btn .btn-green .fs-5 .mb-4 .mb-md-0 }
 [MGG source code](https://github.com/ermismd/MGG){: .btn .btn-green .fs-5 .mb-4 .mb-md-0 }
 [Tutorial files](https://github.com/hariszaf/microbetag/tree/gh-pages/download/mgg){: .btn .btn-purple .fs-5 .mb-4 .mb-md-0 }
 

diff --git a/docs/modules/modules.md b/docs/modules/modules.md
@@ -3,7 +3,7 @@ layout: default
 title: Modules
 nav_order: 2
 has_children: true
-permalink: /docs/modules
+# permalink: /docs/modules
 usemath: true
 ---
 

diff --git a/docs/tutorials/prep.md b/docs/tutorials/prep.md
@@ -2,7 +2,7 @@
 title: microbetag-prep
 layout: default
 parent: Additional tutorials
-version: latest
+# version: latest
 # permalink: /docs/{{ page.version }}/tutorials
 nav_order: 1
 description: "an example case of how to run the microbetag prep step"

diff --git a/docs/tutorials/tutorials.md b/docs/tutorials/tutorials.md
@@ -3,7 +3,7 @@ layout: default
 title: Additional tutorials
 nav_order: 4
 has_children: true
-permalink: /docs/tutorials
+# permalink: /docs/tutorials
 usemath: true
 ---