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title: Save annotated network | ||
layout: default | ||
parent: Cytoscape tutorials | ||
nav_order: 5 | ||
description: "tutorial on how to save your current work" | ||
--- | ||
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It is rather common for Cytoscape users to save the whole session they are working with as a `.cys` file by simply clicking on `File > Save Session As...` and giving a name to their session. | ||
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{: .warning} | ||
Due to a buG in the current MGG implementation, if you save your `microbetag`-annotated network as a session, then you most probably will not be able to parse the seed and pathway complementarities **once you re-open** the session. | ||
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We already work on fixing the bug so we support this really handy Cytoscape feature. | ||
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Until then, one can save a `microbetag`-annotated network as described here, in order to have all the MGG features once they re-open it: | ||
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- Click on `File > Export >Network to File..` | ||
- From the list of File Formats, select the `CX JSON (*.cx)` one | ||
- Give a name to your `microbetag`-annotated network and press `OK`. | ||
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**Remember** that in this way, you only save the specific network and not all the networks you may have opened in your session! | ||
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{: .note} | ||
You can always save your session normally, export the `microbetag`-annotated network as described above and when you want to open your session as it used to be, then you first load the session and from there you import the `.cx` file you exported. This will be *equivalent* with saving the whole original session. | ||
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Now you can re-open the `microbetag`-annotated network as descrobed [here](../tutorials/load.md#load-already-microbetag-annotated-networks). | ||
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