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[DO NOT MERGE] Numpy2#50

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jeremyleung521 wants to merge 39 commits intodevelopjeremyleung521/westpa:developfrom numpy2jeremyleung521/westpa:numpy2Copy head branch name to clipboard

+163-80

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Commits on Jan 18, 2024

• initial fix with ruff

  alexmgoldberg

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Commits on Jan 19, 2024

• true NPY201 fixes

  jeremyleung521

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• remove ruff lines

  jeremyleung521

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• Merge pull request #1 from jeremyleung521/numpy2

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  alexmgoldberg

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Commits on Mar 25, 2024

• initial fix with ruff

  

  alexmgoldberg

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  jeremyleung521

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• true NPY201 fixes

  jeremyleung521

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  1aee1c3

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• remove ruff lines

  jeremyleung521

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Commits on Apr 5, 2024

• Merge branch 'develop' of ssh://github.com/westpa/westpa into numpy2

  jeremyleung521

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• some changes to the cython code for numpy 2

  jeremyleung521

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• bump minimum version for dependencies

  jeremyleung521

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Commits on Sep 4, 2024

• Merge branch 'numpy2' of github.com:jeremyleung521/westpa into numpy2

  jeremyleung521

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• Merge branch 'develop' of github.com:jeremyleung521/westpa into numpy2

  jeremyleung521

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• not in h5diff.py

  jeremyleung521

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• pin to numpy2, <3

  jeremyleung521

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• drop python 3.8, bump to 3.12

  jeremyleung521

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Commits on Oct 14, 2024

• Merge branch 'develop' into numpy2

  jeremyleung521

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Commits on Dec 11, 2024

• Merge branch 'develop' of ssh://github.com/westpa/westpa into numpy2

  jeremyleung521

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• update westpa dependencies for numpy2

  jeremyleung521

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Commits on Dec 12, 2024

• pin numpy versions correctly

  jeremyleung521

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• Merge branch 'develop' of ssh://github.com/westpa/westpa into numpy2

  jeremyleung521

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• remove np.msort

  jeremyleung521

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• cpdef is probably more appropriate

  jeremyleung521

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• Merge branch 'develop' of ssh://github.com/westpa/westpa into numpy2

  jeremyleung521

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  58b06d6

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• drop py<= 3.8 support, hopefully allow numpy2 testing?

  jeremyleung521

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• print conda env before moving on in testing

  jeremyleung521

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• update ref file for numpy2

  jeremyleung521

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• Revert "update ref file for numpy2"

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  jeremyleung521

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Commits on Jan 9, 2025

• fix numpy str/repr changes in numpy2

  jeremyleung521

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• use tmp_path instead of tmp_dir

  jeremyleung521

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• for some reason the fixtures folder is not recognized locally by pytest. moving it so it will get recognized

  jeremyleung521

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Commits on Jan 10, 2025

• fix fixtures folder

  jeremyleung521

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Commits on Jan 16, 2025

• readability first for output

  jeremyleung521

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• can't set to -1 if it's unsigned int

  jeremyleung521

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• let's see if these new files solve the mab tests

  jeremyleung521

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• Revert "let's see if these new files solve the mab tests"

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Commits on Jan 22, 2025

• do stable argsort for mab

  jeremyleung521

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• use np.trapezoid instead of np.trapz due to deprecation

  jeremyleung521

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• force stable sorting everywhere

  jeremyleung521

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• test on numpy1 and numpy2

  jeremyleung521

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