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adding trivial mediator db information
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dominik-kopczynski committed Nov 30, 2023
1 parent 5eebb62 commit a3af905
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4 changes: 2 additions & 2 deletions Goslin.g4
Original file line number Diff line number Diff line change
Expand Up @@ -179,8 +179,8 @@ mediator_tetranor : 'tetranor-' | 'Tetranor-';
mediator_functional_group_clear: mediator_full_function | mediator_function_unknown_pos;
mediator_function_unknown_pos : mediator_functions;
mediator_functions : mediator_mono_functions | mediator_di_functions;
mediator_mono_functions: 'H' | 'Oxo' | 'oxo' | 'OXO' | 'Hp' | 'NO2';
mediator_di_functions: 'E' | 'Ep' | 'DH' | 'DiH' | 'diH';
mediator_mono_functions: 'H' | 'Oxo' | 'oxo' | 'OXO' | 'Hp' | 'HP' | 'NO2';
mediator_di_functions: 'E' | 'Ep' | 'EP' | 'DH' | 'DiH' | 'diH';
mediator_full_function : mediator_position_group '-' mediator_mono_functions | mediator_di_pos '-' mediator_di_functions;
mediator_di_pos: mediator_position_group ',' mediator_position_group | mediator_position_group '_' mediator_position_group | mediator_position_group '(' mediator_position_group ')';
mediator_position_group : mediator_position | mediator_position mediator_position_isotope | mediator_position '(' mediator_position_isotope ')';
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106 changes: 106 additions & 0 deletions trivial_mediators.csv
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9S-HpODE 10,12
13-Oxo-ODE 9,11
9S-HOTrE 10,12,15
13S-HpODE 9,11
13R-HODE 9,11
9(10)-EpOME 12
12(13)-EpOME 9
13S-HOTrE 9,11,15
12,13S-EOT 9,11,15
8R-HpOME 9
13R-HpOME 11
13S-HpOME 11
12R-HpOME 13
12S-HpOME 13
14R-HpOME 12
14S-HpOME 12
12R-HpOME 13
12S-HpOME 13
10R-HpOME 11
7-HpOME 5
8-HpOME 6
9-HpOME 7
11-HpOME 9
12-HpOME 10
10R-HOME 11
10S-HOME 11
12R-HOME 13
12S-HOME 13
11R-HOME 12
11S-HOME 12
12R-HOME 10
12S-HOME 10
12R-HOME 13
12S-HOME 13
13R-HOME 11
13S-HOME 11
11R-HOME 12
11S-HOME 12
6-HpOME 7
13-HpOME 14
8R-HpODE 9,12
13S-HpOTrE 9,11,14
11S-HpODE 9,12
9-HODE 10,12
9S-HODE 10,12
12R-HODE 9,15
13R-HODE 9,11
8R-HOME 9
7S,8S-DiHODE 9,12
7S,8S-DiHOME 9
7S,8S-DiHOTrE 9,12,15
8S-HODE 9,12
13S-HODE 9,11
9,10-DiHOME 12
12,13-DiHOME 9
9-OxoODE 10,12
12,13S-EpODE 9,11
12S,13R-EpOME 9
9R,10S-EpOME 12
8R-HODE 9,12
17R,18S-EpETE 5,8,11,14
5S,12R-diHETE 6,8,10,14
12S-HHTrE 5,8,10
15-HETrE 8,11,13
5-HETrE 6,8,11
8-HETrE 9,11,14
12-oxoHT 5,8,10
20-HETE 5,8,11,14
5S-HpETE 6,8,11,14
15S-HpETE 5,8,11,13
11R-HETE 5,8,12,14
8R-HpETE 5,9,11,14
5,12-DiHETE 6,8,10,14
8-HETE 5,9,11,14
9-HETE 5,7,11,14
11-HETE 5,8,12,14
12-HETE 5,8,10,14
12(S)-HETE 5,8,10,14
12-HETE 5,8,10,14
15-HETE 5,8,11,13
15(R)-HETE 5,8,11,13
5S,11R-DiHETE 6,8,12,14
15-HPETE 5,8,11,13
16-HETE 5,8,11,14
19-HETE 5,8,11,14
5,15-DiHETE 6,8,11,13
5-HPETE 6,8,11,14
13R-HETE 5,8,11,14
11-HEPE 5,8,12,14,17
14R,15S-EpETrE 5,8,11
5,6-EET 8,11,14
8,9-EET 5,11,14
11,12-EET 5,8,14
14,15-EET 5,8,11
14S,15R-EpETrE 5,8,11
11S,12R-EpETrE 5,8,14
11R,12S-EpETrE 5,8,14
5R,6S-EpETrE 8,11,14
5S,6R-EpETrE 8,11,14
8R,9S-EpETrE 5,11,14
8S,9R-EpETrE 5,11,14
17,18-diHEPE 5,8,11,13,15
17R,18R-diHEPE 5,8,11,13,15
17,18-diHEPE 5,8,11,13,15
17R,18S-diHEPE 5,8,11,13,15
10S,17S-DiHDoHE 4,7,11,13,15,19

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