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lmiq committed Aug 1, 2024
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4 changes: 2 additions & 2 deletions ComplexMixtures/index.html
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<html>
<html>
<head>
<title>CRFit - Institute of Chemistry - UNICAMP</title>
<title>ComplexMixtures.jl - Institute of Chemistry - UNICAMP</title>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
</head>
<meta HTTP-EQUIV="REFRESH" content="0; url=https://m3g.github.io/ComplexMixtures.jl/stable">
<meta HTTP-EQUIV="REFRESH" content="0; url=https://m3g.github.io/ComplexMixtures.jl">
Opening page...
</html>
7 changes: 7 additions & 0 deletions README.md
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# m3g.github.io

Martínez Molecular Modeling Group (M3G) home page repository:

## [https://m3g.github.io](https://m3g.github.io)


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<table width=100% align=center>
<tr bgcolor=#66CC99>
<td align=center width=33%><b><a class="menulink" href=/atd-scripts>Home</a></b> </td>
<td align=center width=33%><b><a class="menulink" href=/atd-scripts/usage.shtml>Usage</a></b></td>
<td align=center width=33%><b><a class="menulink" href=/atd-scripts/download.shtml>Download</a></b></td>
<td align=center width=33%><b><a class="menulink" href=/atd-scripts/usage.html>Usage</a></b></td>
<td align=center width=33%><b><a class="menulink" href=/atd-scripts/download.html>Download</a></b></td>
</tr>
<tr>
<td colspan=3>
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<tr>
<td>
<a href=/packmol target="_blank">Packmol</a><br>
<a href=http://www.ime.unicamp.br/~martinez/lovoalign target="_blank">LovoAlign</a><br>
<a href=/main/software.shtml target="_blank">Author's software page</a><br>
<a href=https://m3g.github.io/lovoalign target="_blank">LovoAlign</a><br>
<a href=/main/software.html target="_blank">Author's software page</a><br>
<a href=http://www.ime.usp.br/~egbirgin/tango target="_blank">The TANGO project</a><br>
</td>
</tr>
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<table width=100% align=center>
<tr bgcolor=#66CC99>
<td align=center width=33%><b><a class="menulink" href=/lovofit>Home</a></b> </td>
<td align=center width=33%><b><a class="menulink" href=/lovofit/usage.shtml>Usage</a></b></td>
<td align=center width=33%><b><a class="menulink" href=/lovofit/usage.html>Usage</a></b></td>
</tr>
<tr>
<td colspan=3>
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<tr>
<td>
<a href=/packmol target="_blank">Packmol</a><br>
<a href=http://www.ime.unicamp.br/~martinez/lovoalign target="_blank">LovoAlign</a><br>
<a href=https://m3g.github.io/lovoalign target="_blank">LovoAlign</a><br>
<a href=/mdlovofit target="_blank">MDLovoFit</a><br>
<a href=http://m3g.github.io/ target="_blank">M3G home-page</a><br>
<a href=https://m3g.github.io/ target="_blank">M3G home-page</a><br>
<a href=http://www.ime.usp.br/~egbirgin/tango target="_blank">The TANGO project</a><br>
</td>
</tr>
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</td></tr></table>


{% include main/tail.shtml %}
{% include main/tail.html %}

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{% include main/head.shtml %}
{% include main/head.html %}

<p class=section>Material didático</p>

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51 changes: 51 additions & 0 deletions _includes/main/group_photos.html
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<script type="text/javascript">
let pics = [
{
image: './group_photos/grupo2015.jpg',
caption: "Mariana, Tayane, Luciano, Emília, Gabriel, and Ivan, 2015"
},
{
image: './group_photos/grupo2017.png',
caption: "Guilherme, Leandro, Gabriel, Antônio, Luciano, 2017"
},
{
image: './group_photos/grupo2017b.png',
caption: "Guilherme, Tayane, Adriano, Gabriel, Leandro, Antônio, and Luciano, 2017"
},
{
image: './group_photos/pibicem2019.png',
caption: "Leandro, Alex, and Michael, receiving the honorable mention for their high-school research project, 2019."
},
{
image: './group_photos/group2021_online.png',
caption: "Leandro, Brenda, Guilherme, Felipe, Filipe, Allan, Ander, Vinicius, Pamella, Alexandre, Diego, 2021."
},
{
image: './group_photos/grupo2022.jpg',
caption: "Felipe, Vinicius, Pamella, Ander, Guilherme, Leandro, 2022."
},
{
image: './group_photos/grupo2023_1.jpg',
caption: "Leandro presenting at the 2023 Brazilian Biophysical Society Meeting."
},
{
image: './group_photos/grupo2023_2.jpg',
caption: "Lucas presenting at the 2023 Brazilian Biophysical Society Meeting."
},
{
image: './group_photos/defesa_pamella_2023.jpg',
caption: "Alessandro, Munir, Pamella, and Leandro, Pamella dissertation thesis, 2023."
},
{
image: './group_photos/cces2024.png',
caption: "Ana Beatriz, Jéssica, Pâmella, Camila, Leandro, Eduard, Felipe, Lucas, CCES meeting, 2024."
},
{
image: './group_photos/2023_aniversario.png',
caption: "Lucas, Leandro, Pamella, and Jéssica, 2023."
}
];
let randomIndex = Math.floor(Math.random() * pics.length);
let rndpic = pics[randomIndex];
document.write("<img width=485px src='" +rndpic.image+ "'><br>"+rndpic.caption);
</script>
37 changes: 0 additions & 37 deletions _includes/main/group_photos.shtml

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<head>
<meta http-equiv="refresh" content="30; url=/main/home.shtml">
<meta http-equiv="refresh" content="30; url=/main/home.html">
<link rel="stylesheet" type="text/css" href="/main/estilo.css">
<title>TOPOLINK - Institute of Chemistry - UNICAMP</title>
{% include js/popup.js %}
</head>
<body>

{% include main/title.shtml %}
{% include main/title.html %}

{% include main/menu.shtml %}
{% include main/menu.html %}

{% comment %}CONTENT STARTS HERE {% endcomment %}

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</head>
<body>

{% include main/title.shtml %}
{% include main/title.html %}

{% include main/menu.shtml %}
{% include main/menu.html %}

{% comment %}CONTENT STARTS HERE {% endcomment %}

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18 changes: 9 additions & 9 deletions _includes/main/menu.shtml → _includes/main/menu.html
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</tr>
<tr>
<td class=tdmenu>
<a class=menulink href=/main/home.shtml>Home</a><br>
<a class=menulink href=/main/people.shtml>People</a><br>
<a class=menulink href=/main/bysubject.shtml>Publications</a><br>
<a class=menulink href=/main/software.shtml>Software</a><br>
<a class=menulink href=/main/contact.shtml>Contact</a><br>
<a class=menulink href=/main/home.html>Home</a><br>
<a class=menulink href=/main/people.html>People</a><br>
<a class=menulink href=/main/publications_by_subject.html>Publications</a><br>
<a class=menulink href=/main/software.html>Software</a><br>
<a class=menulink href=/main/contact.html>Contact</a><br>
</td>
</tr>
<tr>
<td class="tdclean0" height=30px></td>
</tr>
<tr>
<td class="tdmenu" bgcolor=#e9c46a align=center>
<b><a class=menutitlelink href=/main/didatico.shtml>Material Didático</a></b> <br>
<b><a class=menutitlelink href=/main/didatico.html>Material Didático</a></b> <br>
</td>
</tr>
</tr>
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<td class="tdclean" width=100% valign="top">
<table width=100% align=center>
<tr bgcolor=#264653>
<td align=center width=33% class=tdmenu><b><a class="menulink" href=/main/home.shtml>
<td align=center width=33% class=tdmenu><b><a class="menulink" href=/main/home.html>
<font color=#e9c46a>Home</font>
</a></b> </td>
<td align=center width=33% class=tdmenu><b><a class="menulink" href=/main/bysubject.shtml>
<td align=center width=33% class=tdmenu><b><a class="menulink" href=/main/publications_by_subject.html>
<font color=#e9c46a>Publications</font>
</a></b> </td>
<td align=center width=33% class=tdmenu><b><a class="menulink" href=/main/software.shtml>
<td align=center width=33% class=tdmenu><b><a class="menulink" href=/main/software.html>
<font color=#e9c46a>Software</font>
</a></b> </td>
</tr>
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var ii = 5
text[ii] = "Automatic identification of mobile substructures in protein MD simulations."
link[ii] = "http://m3g.github.io/mdlovofit"
link[ii] = "https://m3g.github.io/mdlovofit"
img[ii] = "https://m3g.github.io/packmol/mdlovofit.png"

var ii = 6
text[ii] = "TopoLink: Find the shortest path at a protein surface for XL evaluation."
link[ii] = "http://m3g.github.io/topolink"
link[ii] = "https://m3g.github.io/topolink"
img[ii] = "/main/picks/topolink_drawing.png"

var rand = 1000/text.length
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{% include main/title.shtml %}
{% include main/menu.shtml %}
{% include main/title.html %}
{% include main/menu.html %}

{% include main/content_start.shtml %}
{% include main/content_start.html %}

<p class=section>Publications</p>

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2 changes: 1 addition & 1 deletion _includes/main/title.shtml → _includes/main/title.html
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<br><br>
<table width=100% align=center valign=center><tr valign=center>
<td class="tdtitle" align=left valign=center width=190px valign=center>
<a href="/main/logo.shtml"><img src="/main/logo/m3g.svg" width=180px valign=center></a>
<a href="/main/logo.html"><img src="/main/logo/m3g.svg" width=180px valign=center></a>
</td>
<td class="tdtitle" valign=center align=left>
<h1><font color=black> Martínez Molecular Modeling Group </font> </h1>
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---
---
{% include main/head.shtml %}
{% include main/head.html %}

<h2>How to use TOPOLINK</h2>
<br>
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<br>
<table align=center width=80%>
<tr><td colspan=2 class=tdclean><h3> Sections: </h3></td</tr>
<tr><td width=50% class=tdclean bgcolor=orange align=center><a href=./usage.shtml><b>INPUT</b></a></td>
<td width=50% class=tdclean bgcolor=orange align=center><a href=./output.shtml><b>OUTPUT</b></a></td></tr>
<tr><td width=50% class=tdclean bgcolor=orange align=center><a href=./usage.html><b>INPUT</b></a></td>
<td width=50% class=tdclean bgcolor=orange align=center><a href=./output.html><b>OUTPUT</b></a></td></tr>
</table>
</center>
<br><br>
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{% include main/tail.shtml %}
{% include main/tail.html %}



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Expand Up @@ -16,8 +16,8 @@ <h3>Institute of Chemistry - University of Campinas</h3>
<table width=100% align=center>
<tr bgcolor=#66CC99>
<td align=center width=33%><b><a class="menulink" href=/mdlovofit>Home</a></b> </td>
<td align=center width=33%><b><a class="menulink" href=/mdlovofit/tutorial1.shtml>Usage</a></b></td>
<td align=center width=33%><b><a class="menulink" href=/mdlovofit/download.shtml>Download</a></b></td>
<td align=center width=33%><b><a class="menulink" href=/mdlovofit/tutorial1.html>Usage</a></b></td>
<td align=center width=33%><b><a class="menulink" href=/mdlovofit/download.html>Download</a></b></td>
</tr>
<tr>
<td colspan=3>
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<tr>
<td>
<a href=https://m3g.github.io/packmol target="_blank">Packmol</a><br>
<a href=http://www.ime.unicamp.br/~martinez/lovoalign target="_blank">LovoAlign</a><br>
<a href=https://m3g.github.io/lovoalign target="_blank">LovoAlign</a><br>
<a href=https://m3g.github.io/lovofit target="_blank">LovoFit</a><br>
<a href=https://m3g.github.io/main/software.shtml target="_blank">Author's software page</a><br>
<a href=https://m3g.github.io/main/software.html target="_blank">Author's software page</a><br>
<a href=http://www.ime.usp.br/~egbirgin/tango target="_blank">The TANGO project</a><br>
</td>
</tr>
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<table width=100%>
<tr>
<td class="tdclean" width=45% align=center bgcolor=lightblue>
<a href=/mdlovofit/tutorial1.shtml>Tutorial</a>
<a href=/mdlovofit/tutorial1.html>Tutorial</a>
</td>
<td class= "tdclean" width=45% align=center bgcolor=lightblue>
<a href=/mdlovofit/input_options.shtml>Input options</a>
<a href=/mdlovofit/input_options.html>Input options</a>
</td>
</tr>
</table>
15 changes: 15 additions & 0 deletions _includes/topolink/head-refresh.html
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<head>
<meta http-equiv="refresh" content="30; url=./index.html">
<link rel="stylesheet" type="text/css" href="https://m3g.github.io/topolink/estilo.css">
<title>TOPOLINK - Institute of Chemistry - UNICAMP</title>
{% include js/popup.js %}
</head>
<body>

{% include topolink/title.html %}

{% include topolink/menu.html %}

{% comment %} CONTENT STARTS HERE {% endcomment %}


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</head>
<body>

{% include topolink/title.shtml %}
{% include topolink/title.html %}

{% include topolink/menu.shtml %}
{% include topolink/menu.html %}

{% comment %} CONTENT STARTS HERE {% endcomment %}

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