RagTag v1.0.2
Enhancements
-
ragtag_agp2fasta.py
can now handle portions of components, making it generic. -
Two new AGP utilities have been added:
agp2fasta
andagpcheck
. The former generates AGP objects in fasta format given an AGP file and a components fasta file. The later performs most checks to ensure AGP file format validity.
Citation
Alonge, Michael, et al. "RaGOO: fast and accurate reference-guided scaffolding of draft genomes." Genome biology 20.1 (2019): 1-17.