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4 changes: 2 additions & 2 deletions docs/javadocs/jutils/allclasses-index.html
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<title>All Classes and Interfaces (JUtils - Miscellanea of Java Utils 14.1-SNAPSHOT API)</title>
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4 changes: 2 additions & 2 deletions docs/javadocs/jutils/allpackages-index.html
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4 changes: 2 additions & 2 deletions docs/javadocs/jutils/constant-values.html
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<title>Constant Field Values (JUtils - Miscellanea of Java Utils 14.1-SNAPSHOT API)</title>
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4 changes: 2 additions & 2 deletions docs/javadocs/jutils/deprecated-list.html
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4 changes: 2 additions & 2 deletions docs/javadocs/jutils/help-doc.html
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54 changes: 44 additions & 10 deletions docs/javadocs/jutils/index-all.html
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<title>Index (JUtils - Miscellanea of Java Utils 14.1-SNAPSHOT API)</title>
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Expand Down Expand Up @@ -1275,10 +1275,14 @@ <h2 class="title" id="I:N">N</h2>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newCollection(java.util.Collection,java.util.function.Supplier)" class="member-name-link">newCollection(Collection&lt;? extends T&gt;, Supplier&lt;C&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>
<div class="block">TODO: newXXX() and unmodifiableXXX(), comment and test</div>
<div class="block">Returns a new collection containing the elements in the parameter, using
the provider.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newCollectionIfNull(C,java.util.function.Supplier)" class="member-name-link">newCollectionIfNull(C, Supplier&lt;C&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dd>
<div class="block">If coll is not null, returns, it, else returns a new empty collection,
using the provider.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/threading/fakelocks/FakeLock.html#newCondition()" class="member-name-link">newCondition()</a> - Method in class uk.ac.ebi.utils.threading.fakelocks.<a href="uk/ac/ebi/utils/threading/fakelocks/FakeLock.html" title="class in uk.ac.ebi.utils.threading.fakelocks">FakeLock</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/opt/orm/test/TestEntityMgrProvider.html#newEntityManager()" class="member-name-link">newEntityManager()</a> - Method in class uk.ac.ebi.utils.opt.orm.test.<a href="uk/ac/ebi/utils/opt/orm/test/TestEntityMgrProvider.html" title="class in uk.ac.ebi.utils.opt.orm.test">TestEntityMgrProvider</a></dt>
Expand All @@ -1292,24 +1296,44 @@ <h2 class="title" id="I:N">N</h2>
using the factory passed to the constructor.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newList(java.util.Collection)" class="member-name-link">newList(Collection&lt;? extends T&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>
<div class="block">Defaults to <a href="https://docs.oracle.com/en/java/javase/17/docs/api/java.base/java/util/ArrayList.html" title="class or interface in java.util" class="external-link"><code>ArrayList</code></a> as provider</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newList(java.util.Collection,java.util.function.Supplier)" class="member-name-link">newList(Collection&lt;? extends T&gt;, Supplier&lt;List&lt;T&gt;&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newListIfNull(java.util.List)" class="member-name-link">newListIfNull(List&lt;T&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>
<div class="block">Defaults to <a href="https://docs.oracle.com/en/java/javase/17/docs/api/java.base/java/util/ArrayList.html" title="class or interface in java.util" class="external-link"><code>ArrayList</code></a> as provider.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newListIfNull(java.util.List,java.util.function.Supplier)" class="member-name-link">newListIfNull(List&lt;T&gt;, Supplier&lt;List&lt;T&gt;&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newMap(java.util.Map)" class="member-name-link">newMap(Map&lt;? extends K, ? extends V&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dd>
<div class="block">Defaults to <a href="https://docs.oracle.com/en/java/javase/17/docs/api/java.base/java/util/HashMap.html" title="class or interface in java.util" class="external-link"><code>HashMap</code></a> as provider</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newMap(java.util.Map,java.util.function.Supplier)" class="member-name-link">newMap(Map&lt;? extends K, ? extends V&gt;, Supplier&lt;Map&lt;K, V&gt;&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newMapIfNull(java.util.Map)" class="member-name-link">newMapIfNull(Map&lt;K, V&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dd>
<div class="block">Defaults to <a href="https://docs.oracle.com/en/java/javase/17/docs/api/java.base/java/util/HashMap.html" title="class or interface in java.util" class="external-link"><code>HashMap</code></a> as provider.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newMapIfNull(M,java.util.function.Supplier)" class="member-name-link">newMapIfNull(M, Supplier&lt;M&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/threading/BatchService.html#newPoolSizeTuner()" class="member-name-link">newPoolSizeTuner()</a> - Method in class uk.ac.ebi.utils.threading.<a href="uk/ac/ebi/utils/threading/BatchService.html" title="class in uk.ac.ebi.utils.threading">BatchService</a></dt>
<dd>
<div class="block">Allows you to initialise with a custom <code><a href="uk/ac/ebi/utils/threading/BatchService.html" title="class in uk.ac.ebi.utils.threading">BatchService</a>&lt;<a href="uk/ac/ebi/utils/threading/BatchService.html" title="type parameter in BatchService">TK</a> extends <a href="uk/ac/ebi/utils/threading/BatchServiceTask.html" title="class in uk.ac.ebi.utils.threading">BatchServiceTask</a>&gt;.<a href="uk/ac/ebi/utils/threading/BatchService.BatchServiceTuner.html" title="class in uk.ac.ebi.utils.threading">BatchServiceTuner</a></code>.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newSet(java.util.Collection)" class="member-name-link">newSet(Collection&lt;? extends T&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>
<div class="block">Defaults to <a href="https://docs.oracle.com/en/java/javase/17/docs/api/java.base/java/util/HashSet.html" title="class or interface in java.util" class="external-link"><code>HashSet</code></a> as provider.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newSet(java.util.Collection,java.util.function.Supplier)" class="member-name-link">newSet(Collection&lt;? extends T&gt;, Supplier&lt;Set&lt;T&gt;&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newSetIfNull(java.util.Set)" class="member-name-link">newSetIfNull(Set&lt;T&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>
<div class="block">Defaults to <a href="https://docs.oracle.com/en/java/javase/17/docs/api/java.base/java/util/HashSet.html" title="class or interface in java.util" class="external-link"><code>HashSet</code></a> as provider.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#newSetIfNull(java.util.Set,java.util.function.Supplier)" class="member-name-link">newSetIfNull(Set&lt;T&gt;, Supplier&lt;Set&lt;T&gt;&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/threading/BatchService.html#newThreadPoolExecutor(int)" class="member-name-link">newThreadPoolExecutor(int)</a> - Method in class uk.ac.ebi.utils.threading.<a href="uk/ac/ebi/utils/threading/BatchService.html" title="class in uk.ac.ebi.utils.threading">BatchService</a></dt>
<dd>
Expand Down Expand Up @@ -2243,13 +2267,21 @@ <h2 class="title" id="I:U">U</h2>
<dt><a href="uk/ac/ebi/utils/threading/fakelocks/FakeLock.html#unlock()" class="member-name-link">unlock()</a> - Method in class uk.ac.ebi.utils.threading.fakelocks.<a href="uk/ac/ebi/utils/threading/fakelocks/FakeLock.html" title="class in uk.ac.ebi.utils.threading.fakelocks">FakeLock</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableCollection(CP,java.util.function.Function,java.util.function.Supplier)" class="member-name-link">unmodifiableCollection(CP, Function&lt;CP, C&gt;, Supplier&lt;C&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dd>
<div class="block">Always returns an unmodifiable collection wrapping the parameter.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableList(java.util.List)" class="member-name-link">unmodifiableList(List&lt;? extends T&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dd>
<div class="block"><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableCollection(CP,java.util.function.Function,java.util.function.Supplier)"><code>CollectionsUtils.unmodifiableCollection(Collection, Function, Supplier)</code></a></div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableMap(java.util.Map)" class="member-name-link">unmodifiableMap(Map&lt;? extends K, ? extends V&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableMap(java.util.Map,java.util.function.Supplier)" class="member-name-link">unmodifiableMap(Map&lt;? extends K, ? extends V&gt;, Supplier&lt;Map&lt;K, V&gt;&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dd>
<div class="block">This doesn't use
<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableCollection(CP,java.util.function.Function,java.util.function.Supplier)"><code>CollectionsUtils.unmodifiableCollection(Collection, Function, Supplier)</code></a>, but
has an implementation based on the same logic.</div>
</dd>
<dt><a href="uk/ac/ebi/utils/collections/OptionsMap.html#unmodifiableOptionsMap(java.util.Map)" class="member-name-link">unmodifiableOptionsMap(Map&lt;String, Object&gt;)</a> - Static method in interface uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/OptionsMap.html" title="interface in uk.ac.ebi.utils.collections">OptionsMap</a></dt>
<dd>
<div class="block">This is simply the chaining of <a href="uk/ac/ebi/utils/collections/OptionsMap.html#from(java.util.Map)"><code>OptionsMap.from(Map)</code></a> and <a href="https://docs.oracle.com/en/java/javase/17/docs/api/java.base/java/util/Collections.html#unmodifiableMap(java.util.Map)" title="class or interface in java.util" class="external-link"><code>Collections.unmodifiableMap(Map)</code></a>, ie, returns
Expand All @@ -2258,7 +2290,9 @@ <h2 class="title" id="I:U">U</h2>
<dt><a href="uk/ac/ebi/utils/collections/OptionsMap.html#unmodifiableOptionsMap(java.util.Properties)" class="member-name-link">unmodifiableOptionsMap(Properties)</a> - Static method in interface uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/OptionsMap.html" title="interface in uk.ac.ebi.utils.collections">OptionsMap</a></dt>
<dd>&nbsp;</dd>
<dt><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableSet(java.util.Set)" class="member-name-link">unmodifiableSet(Set&lt;? extends T&gt;)</a> - Static method in class uk.ac.ebi.utils.collections.<a href="uk/ac/ebi/utils/collections/CollectionsUtils.html" title="class in uk.ac.ebi.utils.collections">CollectionsUtils</a></dt>
<dd>&nbsp;</dd>
<dd>
<div class="block"><a href="uk/ac/ebi/utils/collections/CollectionsUtils.html#unmodifiableCollection(CP,java.util.function.Function,java.util.function.Supplier)"><code>CollectionsUtils.unmodifiableCollection(Collection, Function, Supplier)</code></a></div>
</dd>
<dt><a href="uk/ac/ebi/utils/runcontrol/ProgressLogger.html#update(long)" class="member-name-link">update(long)</a> - Method in class uk.ac.ebi.utils.runcontrol.<a href="uk/ac/ebi/utils/runcontrol/ProgressLogger.html" title="class in uk.ac.ebi.utils.runcontrol">ProgressLogger</a></dt>
<dd>
<div class="block">Updates the current progress and possibly generates a new log message, according to <a href="uk/ac/ebi/utils/runcontrol/ProgressLogger.html#getProgressResolution()"><code>ProgressLogger.getProgressResolution()</code></a>.</div>
Expand Down
4 changes: 2 additions & 2 deletions docs/javadocs/jutils/index.html
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<title>Overview (JUtils - Miscellanea of Java Utils 14.1-SNAPSHOT API)</title>
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<title>JUtils - Miscellanea of Java Utils 14.1-SNAPSHOT API</title>
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