Skip to content

Release_2.4.2
Compare
Choose a tag to compare
@katsikora katsikora released this 22 Dec 18:22
· 931 commits to master since this release
2.4.2
bea1f7b
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Learn about vigilant mode.

snakePipes 2.4.2

  • Deeptools coverage RPKM in mRNA-seq and noncoding-RNA-seq worflows now respects blacklist and ingoreForNorm arguments.
  • In mRNA-seq and noncoding-RNA-seq workflow, deeptools qc will now also output DESeq2 size factor-normalized bigwig files.
  • Fixed conda env for WGBS.
  • Fixed control group ordering in split sample sheets in mRNA-seq and other workflows.
  • Removed rule moving bams from allelic mRNA-seq and DNA-mapping workflows.
Assets 2
Loading