2.5.1
- Updated Bowtie2 parameters for the cut and tag data
- Updated multibamSummary in ChIPSeq pipeline for data with spike-in
- Uncommented the BamCompare for ChIPseq pipeline with spike-in
- set a max thread for each rule
- External PR #764: always check for >0 when generating heatmap for the differential analysis done by deseq2