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chore(deps): update ubuntu docker tag to v22
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renovate-bot committed Mar 31, 2022
1 parent 15a90af commit d072156
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Showing 6 changed files with 6 additions and 6 deletions.
2 changes: 1 addition & 1 deletion docker/toolkit-bwa-samtools/Dockerfile
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FROM quay.io/biocontainers/bwa:0.7.17--h5bf99c6_8 AS bwa

FROM ubuntu:20.04
FROM ubuntu:22.04
ENV SAMTOOLS=samtools-1.12
RUN apt update && apt install -y bc libgomp1 libgetopt-complete-perl wget autoconf automake make gcc perl zlib1g-dev libbz2-dev liblzma-dev libcurl4-gnutls-dev libssl-dev libncurses5-dev
RUN wget -qO- https://github.com/samtools/samtools/releases/download/1.12/samtools-1.12.tar.bz2 | tar jxvf - &&\
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2 changes: 1 addition & 1 deletion docker/toolkit-checkm/Dockerfile
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FROM ubuntu:18.04
FROM ubuntu:22.04
ENV CHECKM_VERSION=1.1.3
COPY run_checkm.sh /usr/local/bin/
COPY config_location.patch /root/
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2 changes: 1 addition & 1 deletion docker/toolkit-cmseq/Dockerfile
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FROM ubuntu:18.04
FROM ubuntu:22.04
WORKDIR /usr/local/bin
ENV LC_ALL=C.UTF-8
RUN apt update && \
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2 changes: 1 addition & 1 deletion docker/toolkit-mob-suite/Dockerfile
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FROM ubuntu:21.04
FROM ubuntu:22.04
ENV VERSION=3.0.3
RUN ln -fs /usr/share/zoneinfo/America/New_York /etc/localtime && \
apt update && apt install wget git python3-pip -y && \
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2 changes: 1 addition & 1 deletion docker/toolkit-prokka/Dockerfile
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FROM ubuntu:18.04
FROM ubuntu:22.04

# metadata
LABEL website="https://github.com/tseemann/prokka"
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2 changes: 1 addition & 1 deletion docker/toolkit-sans/Dockerfile
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FROM ubuntu:18.04
FROM ubuntu:22.04
WORKDIR /sans
RUN apt update && apt install -y wget g++ git make python3.8 python3-dendropy && \
git clone https://gitlab.ub.uni-bielefeld.de/gi/sans.git . && \
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