wip: migrate to lutaml-model from shale

[ronaldtse]

@kwkwan can you please help us migrate to lutaml-model? The specs are failing right now with:

 bundle exec rake
~/.asdf/installs/ruby/3.3.2/bin/ruby -I~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib:~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-support-3.13.2/lib ~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/exe/rspec --pattern spec/\*\*\{,/\*/\*\*\}/\*_spec.rb

Suma
[suma] Current directory: /private/var/folders/2t/xmdrn2sd2lv2w49dv0zw9_q00000gp/T/d20241221-47153-apohj8, writing schemas.yml...
[relaton-bib] WARN: Type `collection` is invalid.
[suma] [ERROR] Error occurred during processing. See details below.
[suma] undefined method `default' for nil
[suma] #<NoMethodError: undefined method `default' for nil>
[suma] ~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:385:in `block in apply_hash_mapping'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:377:in `each'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:377:in `apply_hash_mapping'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:314:in `apply_mappings'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/attribute.rb:227:in `cast'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:397:in `block in apply_hash_mapping'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:377:in `each'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:377:in `apply_hash_mapping'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:314:in `apply_mappings'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:122:in `block (2 levels) in <module:ClassMethods>'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:109:in `public_send'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/lutaml-model-0.3.30/lib/lutaml/model/serialize.rb:109:in `block (2 levels) in <module:ClassMethods>'
~/src/mn/suma/lib/suma/collection_config.rb:15:in `from_file'
~/src/mn/suma/lib/suma/processor.rb:39:in `export_schema_config'
~/src/mn/suma/lib/suma/processor.rb:17:in `run'
~/src/mn/suma/lib/suma/cli.rb:39:in `run'
~/src/mn/suma/lib/suma/cli.rb:26:in `build'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/thor-1.3.2/lib/thor/command.rb:28:in `run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/thor-hollaback-0.2.1/lib/thor/hollaback.rb:68:in `run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/thor-1.3.2/lib/thor/invocation.rb:127:in `invoke_command'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/thor-1.3.2/lib/thor.rb:538:in `dispatch'
~/src/mn/suma/lib/suma/thor_ext.rb:36:in `block in start'
~/src/mn/suma/lib/suma/thor_ext.rb:45:in `handle_help_switches'
~/src/mn/suma/lib/suma/thor_ext.rb:35:in `start'
~/src/mn/suma/spec/suma/cli_spec.rb:24:in `block (2 levels) in <top (required)>'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:263:in `instance_exec'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:263:in `block in run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:511:in `block in with_around_and_singleton_context_hooks'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:468:in `block in with_around_example_hooks'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/hooks.rb:486:in `block in run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/hooks.rb:626:in `block in run_around_example_hooks_for'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:352:in `call'
~/src/mn/suma/spec/suma/cli_spec.rb:18:in `block (4 levels) in <top (required)>'
~/src/mn/suma/spec/suma/cli_spec.rb:17:in `chdir'
~/src/mn/suma/spec/suma/cli_spec.rb:17:in `block (3 levels) in <top (required)>'
~/.asdf/installs/ruby/3.3.2/lib/ruby/3.3.0/tmpdir.rb:99:in `mktmpdir'
~/src/mn/suma/spec/suma/cli_spec.rb:8:in `block (2 levels) in <top (required)>'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:457:in `instance_exec'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:457:in `instance_exec'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/hooks.rb:390:in `execute_with'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/hooks.rb:628:in `block (2 levels) in run_around_example_hooks_for'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:352:in `call'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/hooks.rb:629:in `run_around_example_hooks_for'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/hooks.rb:486:in `run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:468:in `with_around_example_hooks'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:511:in `with_around_and_singleton_context_hooks'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example.rb:259:in `run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example_group.rb:646:in `block in run_examples'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example_group.rb:642:in `map'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example_group.rb:642:in `run_examples'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/example_group.rb:607:in `run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:121:in `block (3 levels) in run_specs'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:121:in `map'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:121:in `block (2 levels) in run_specs'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/configuration.rb:2097:in `with_suite_hooks'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:116:in `block in run_specs'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/reporter.rb:74:in `report'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:115:in `run_specs'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:89:in `run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:71:in `run'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/lib/rspec/core/runner.rb:45:in `invoke'
~/.asdf/installs/ruby/3.3.2/lib/ruby/gems/3.3.0/gems/rspec-core-3.13.2/exe/rspec:4:in `<main>'
  Build simple metanorma.yml manifest (FAILED - 1)
  raise ENOENT for missing manifest
[Errno::ENOENT] No such file or directory - Specified Metanorma site manifest file `not-found.yml` not found.
  non-zero exit code for missing manifest

Suma
  has a version number

Failures:

  1) Suma Build simple metanorma.yml manifest
     Failure/Error: expect(File.exist?("schemas.yml")).to be true
     
       expected true
            got false
     # ./spec/suma/cli_spec.rb:26:in `block (2 levels) in <top (required)>'
     # ./spec/suma/cli_spec.rb:18:in `block (4 levels) in <top (required)>'
     # ./spec/suma/cli_spec.rb:17:in `chdir'
     # ./spec/suma/cli_spec.rb:17:in `block (3 levels) in <top (required)>'
     # ./spec/suma/cli_spec.rb:8:in `block (2 levels) in <top (required)>'

Finished in 0.10002 seconds (files took 2.28 seconds to load)
4 examples, 1 failure

Failed examples:

rspec ./spec/suma/cli_spec.rb:23 # Suma Build simple metanorma.yml manifest

Basically, you can follow the errors using this command at the iso-10303 repo:

# Make sure Gemfile uses this branch of `suma`, then:
bundle exec suma build metanorma-smol.yml

Fixes #17
Fixes #19

[kwkwan]

Hi @ronaldtse, the specs has been failed because there is a bug in apply_mappings when using custom method. It was fixed by @HassanAkbar at (https://github.com/lutaml/lutaml-model/pull/213/files) in branch feature/adding_enum_methods_to_serializeable in lutaml-model.

[kwkwan]

You may either merge the branch or cherry-pick that commit to fix it.

[ronaldtse]

@kwkwan that PR still contains failing tests, I’ve pinged @HassanAkbar to mark it ready and to merge it. Thanks!

[kwkwan]

Hi @ronaldtse, @HassanAkbar has merged the branch and all the specs are now successful.

[ronaldtse]

Thanks @kwkwan , please help merge this.