Ontology imports

Importing a new ontology

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1. add imports to src/ontology/maxo-odk.yaml

• i.e., open maxo-odk.yaml in a text editor and add the new ontology under 'import_group: products:' ex. - id: obi

• Note: if the ontology is large, then should use this and increase docker memory mport_group: products:

  • id: pr use_gzipped: TRUE is_large: TRUE

• If issues, see comments HERE

2. in terminal sh run.sh make update_repo
3. open maxo-edit.owl in text editor add import statement

• I.e., under 'Ontology(http://purl.obolibrary.org/obo/maxo.owl' which is line 12, add a new import statement ex. Import(http://purl.obolibrary.org/obo/maxo/imports/obi_import.owl)

4. open catalog-v001.xml in text editor and add import statement

• Add at least the .owl statement. The obo file is not a requirement. ex.

5. terminal sh run.sh make imports/obi_import.owl
6. open maxo-edit.owl in protege and run reasoner to look for unsatisfiable classes