Skip to content

I am sharing my journey, trying to learn about coding as a biology student, these codes are so so simple, basically as my memo notes.

Notifications You must be signed in to change notification settings

negkhalili/compgenom

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

6 Commits
 
 
 
 
 
 

Repository files navigation

learning to understand biological data

I am sharing my journey, trying to learn about coding as a biology learner, these codes are simple, basically as my memo notes.

1-basics_codes: This file explains parsing FASTA files, alignment using clustal Omega, and calculating pairwise distance using Jukes-Cantor model

2-rna_seq_basics : read and preprocess RNAseq data, using DEXSeq package to identify differentially spliced exons, visualize Splicing events using rMATS, calculating the PSI value

I would like to continue my journey and add more to the list

About

I am sharing my journey, trying to learn about coding as a biology student, these codes are so so simple, basically as my memo notes.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages