[MNT] Automated generation of result examples #25
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| name: update examples | |
| on: | |
| pull_request: | |
| workflow_dispatch: | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| jobs: | |
| generate-example-files: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: Set up node env | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: 20 | |
| - name: Create .env file | |
| run: | | |
| echo -e "NB_API_QUERY_URL=https://federate.neurobagel.org/\nNB_ENABLE_AUTH=true\nNB_QUERY_CLIENT_ID=mockclientid" > .env | |
| - name: build | |
| run: npm install && npm run build | |
| - name: Run end to end tests | |
| uses: cypress-io/github-action@v6 | |
| with: | |
| wait-on: http://localhost:5173 | |
| start: npm run preview | |
| spec: cypress/e2e/UpdateExamples.cy.ts | |
| component: false | |
| - name: Upload test artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: query-tool-results | |
| path: cypress/downloads/* | |
| update-query-tool-results: | |
| runs-on: ubuntu-latest | |
| needs: generate-example-files | |
| steps: | |
| - name: Generate a token | |
| id: generate-token | |
| uses: actions/create-github-app-token@v1 | |
| with: | |
| app-id: ${{ vars.NB_BOT_ID }} | |
| private-key: ${{ secrets.NB_BOT_KEY }} | |
| - name: Checkout neurobagel_examples repository | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: neurobagel/neurobagel_examples | |
| token: ${{ steps.generate-token.outputs.token }} | |
| - name: Download artifacts | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: query-tool-results | |
| path: neurobagel_examples/query-tool-results | |
| - name: Install GitHub CLI | |
| run: sudo apt-get install gh -y | |
| - name: Authenticate GitHub CLI | |
| run: echo "${{ steps.generate-token.outputs.token }}" | gh auth login --with-token | |
| - name: Create Pull Request | |
| run: | | |
| git config --global user.name "Neurobagel Bot" | |
| git config --global user.email "neurobagel-bot[bot]@users.noreply.github.com" | |
| git checkout -b update-query-tool-results | |
| git add . | |
| git commit -m "Update query-tool-results files" | |
| git push origin update-query-tool-results | |
| gh pr create --title "Update query-tool-results files" --body "This PR updates the query-tool-results files with the latest changes." --base main --head update-query-tool-results |