Adapter precice 3.1 with 3D support and "point load"

LICENSE → LICENSE

@@ -162,4 +162,4 @@ General Public License ever published by the Free Software Foundation.
 whether future versions of the GNU Lesser General Public License shall
 apply, that proxy's public statement of acceptance of any version is
 permanent authorization for you to choose that version for the
-Library.
+Library.

.gitattributes

@@ -1 +1 @@
-fenicsxprecice/_version.py export-subst
+fenicsxprecice/_version.py export-subst

.gitignore

@@ -4,3 +4,5 @@ dist
 .idea
 *.pyc
 .eggs/
+.vscode
+.venv

.markdown-link-check-config.json

@@ -1,11 +1,11 @@
 {
-  "aliveStatusCodes": [429, 200, 0],
-  "ignorePatterns": [
-    {
-      "pattern": "^https://openfoamwiki.net/"
-    },
-    {
-      "pattern": "^https://doi.org/"
-    }
-  ]
-}
+    "aliveStatusCodes": [429, 200, 0],
+    "ignorePatterns": [
+      {
+        "pattern": "^https://openfoamwiki.net/"
+      },
+      {
+        "pattern": "^https://doi.org/"
+      }
+    ]
+  }

.markdownlint.json

@@ -1,4 +1,4 @@
 {
     "MD013": false,
     "MD033": false
-}
+}

CHANGELOG.md

@@ -2,4 +2,4 @@
 
 ## current development
 
-* Forked initial version of this adapter from [`precice/[email protected]`](https://github.com/precice/fenics-adapter/releases/tag/v1.2.0).
+* Forked initial version of this adapter from [`precice/[email protected]`](https://github.com/precice/fenics-adapter/releases/tag/v1.2.0).

MANIFEST.in

@@ -1,2 +1,2 @@
 include versioneer.py
-include fenicsxprecice/_version.py
+include fenicsxprecice/_version.py

README.md

@@ -20,7 +20,8 @@ Notes:
 
 * This adapter is a fork from the original [FEniCS-preCICE adapter](https://github.com/precice/fenics-adapter). Based on [v1.2.0](https://github.com/precice/fenics-adapter/releases/tag/v1.2.0).
 * This adapter is currently under development and experimental.
-* Target version: dolfinx v0.5.2. Other version that have been tested and might also work: v0.4.1
+* Target version: dolfinx v0.8.0.
+* Target version: preCICE v3.
 
 ## Installing the package
 
@@ -40,11 +41,11 @@ This should work out of the box, if all dependencies are installed correctly and
 
 Make sure to install the following dependencies:
 
-* [preCICE](https://github.com/precice/precice/wiki)
+* [preCICE v3](https://github.com/precice/precice/wiki)
 * python3 (this adapter **only supports python3**)
 * [the python language bindings for preCICE](https://github.com/precice/python-bindings)
 * :construction: [FEniCSx](https://fenicsproject.org/) (with python interface, installed by default) (under construction refer to notes on FEniCSx below) :construction:
-* and scipy (`pip3 install scipy`)
+
 
 #### Build and install the adapter
 
@@ -91,3 +92,5 @@ If you are using FEniCSx, please also consider the information on [the official
 2021: For development of FEniCSx support, `precice/[email protected]` was forked as `precice/fenicsx-adapter`. The required modifications were carried out by [Benjamin Rodenberg](https://www.cs.cit.tum.de/sccs/personen/benjamin-rodenberg/) and [Ishaan Desai](https://www.ipvs.uni-stuttgart.de/institute/team/Desai/).
 
 2023:  [Philip Hildebrand](https://github.com/PhilipHildebrand) updated the adapter to a first minimal working version (https://github.com/precice/fenicsx-adapter/pull/15) and contributed a first tutorial (https://github.com/precice/tutorials/pull/317) in the scope of his Bachelor's thesis ["Extending the FEniCSx Adapter for the Coupling Library preCICE"](https://mediatum.ub.tum.de/node?id=1706280) under supervision of [Benjamin Rodenberg](https://www.cs.cit.tum.de/sccs/personen/benjamin-rodenberg/) and [Ishaan Desai](https://www.ipvs.uni-stuttgart.de/institute/team/Desai/).
+
+2024:  [Eduardo Firvida](https://github.com/efirvida) updated the adapter to a minimal working version (https://github.com/precice/fenicsx-adapter/pull/26) with FSI and 3D support for preCICEv3. In the scope of his PhD Thesis.

fenicsxprecice/__init__.py

@@ -6,6 +6,7 @@
     warnings.warn("No FEniCSx installation found on system. Please check whether it is found correctly. "
                   "The FEniCSx adapter might not work as expected.\n\n")
 
-from .fenicsxprecice import Adapter
 from . import _version
+from .fenicsxprecice import Adapter
+
 __version__ = _version.get_versions()['version']

fenicsxprecice/_version.py

@@ -12,12 +12,12 @@
 """Git implementation of _version.py."""
 
 import errno
+import functools
 import os
 import re
 import subprocess
 import sys
 from typing import Any, Callable, Dict, List, Optional, Tuple
-import functools
 
 
 def get_keywords() -> Dict[str, str]:
@@ -162,7 +162,7 @@ def git_get_keywords(versionfile_abs: str) -> Dict[str, str]:
     # _version.py.
     keywords: Dict[str, str] = {}
     try:
-        with open(versionfile_abs, "r") as fobj:
+        with open(versionfile_abs) as fobj:
             for line in fobj:
                 if line.strip().startswith("git_refnames ="):
                     mo = re.search(r'=\s*"(.*)"', line)