Connected-Component

This repository contains the following functions for connected component analysis of 2D/3D segmentation data:

1. keep_largest_connected_component

2. count_connected_component

3. label_connected_component

Installation instructions

1. Clone/download repository.

2. Change directory into repository.

3. Install:

   pip install .
   

How to use it

• Function imports.

• Command line:

   connected_component --input_dir .\sample_data\0_sample_seg --output_dir .\sample_data\1_output --count_cc --keep_largest_cc