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1,067 Open 716 Closed
1,067 Open 716 Closed
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Issues list

accessing mem_mb from resources in params bug Something isn't working
#3271 opened Jan 24, 2025 by jd3234
CLI documentation contains invalid dashes bug Something isn't working
#3268 opened Jan 23, 2025 by lczech
--delete-all-output ignores --dry-run bug Something isn't working
#3264 opened Jan 22, 2025 by GaspardR
1
Workflow should not fail on clock skew bug Something isn't working
#3261 opened Jan 22, 2025 by Redmar-van-den-Berg
Conda not found in containzerized container bug Something isn't working
#3257 opened Jan 20, 2025 by pdimens
1
Input files from the future enhancement New feature or request
#3254 opened Jan 14, 2025 by lgrcia
1
global conda directive error: The package snakemake-storage-plugin-http is not installed bug Something isn't working
#3252 opened Jan 13, 2025 by danpal96
Support for uv in the integrated package management? enhancement New feature or request
#3251 opened Jan 13, 2025 by adonath
1
Catch error codes of commands executed under the shell directive enhancement New feature or request
#3250 opened Jan 13, 2025 by harrymatthews50
1
error libmamba Non-conda folder exists at prefix error while running snakemake bug Something isn't working
#3249 opened Jan 11, 2025 by enes-ak
1
The issue with --apptainer-prefix and -d bug Something isn't working
#3248 opened Jan 11, 2025 by jmzhang1911
Error handling in snakemake scheduler enhancement New feature or request
#3247 opened Jan 10, 2025 by fujch7
1
Using Multiple Rules from the Same Module Overwrites Aliases in Snakemake bug Something isn't working
#3243 opened Jan 2, 2025 by JieWu-GitHub
Add support for rule grouping to improve workflow organization enhancement New feature or request
#3242 opened Dec 31, 2024 by jiangyun-fun
Worker jobs under SLURM do not receive SIGTERM bug Something isn't working
#3241 opened Dec 29, 2024 by peterjc
More flexible graph display in Snakemake reports enhancement New feature or request
#3239 opened Dec 21, 2024 by johanneskoester
Independent DAG eval due to rerun triggers causes unexpected re-execution and file corruption with executors bug Something isn't working
#3234 opened Dec 17, 2024 by lczech
Minor bug: --rerun-triggers cannot be specific last when also specifying targets bug Something isn't working
#3233 opened Dec 16, 2024 by lczech
Invalid SyntaxWarning: invalid escape sequence bug Something isn't working
#3232 opened Dec 12, 2024 by erfanshekarriz
4
Error: Error loading Snakemake plugin dryrun: The package snakemake-executor-plugin-dryrun is not installed. bug Something isn't working
#3231 opened Dec 11, 2024 by Ulthran
1
hisat2 aligned issue bug Something isn't working
#3230 opened Dec 11, 2024 by yhj-j
1
Stable suport for ARM processors enhancement New feature or request
#3228 opened Dec 10, 2024 by sandrorsduarte
How long could you merge the bug fixation #1708 bug Something isn't working
#3226 opened Dec 9, 2024 by XinWang19
Wildcard values modified in some circumstances bug Something isn't working
#3221 opened Nov 27, 2024 by irr-github
Better way to signal an error to the user enhancement New feature or request
#3214 opened Nov 18, 2024 by jlumpe
1
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