unittest #7

	name: mashpit test

	on: [push]

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.8", "3.9", "3.10"]

	steps:
	- uses: actions/checkout@v4
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	# printing the current Python version
	- name: Display Python version
	run: python -c "import sys; print(sys.version)"
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install .
	- name: Download and set up ncbi datasets client
	run: \|
	mkdir ncbi_datasets
	curl -o ncbi_datasets/datasets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/v2/linux-amd64/datasets'
	chmod +x ncbi_datasets/datasets
	echo "export PATH=$PATH:$PWD/ncbi_datasets" >> $GITHUB_ENV
	which datasets
	- name: Install pytest
	run: \|
	pip install pytest
	- name: Run tests
	working-directory: mashpit/test
	run: \|
	which datasets
	pytest test.py

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