Pre commit update + dependabot CI fix (#372)

.github/workflows/io_tests.yaml

@@ -8,6 +8,7 @@ on:
 
 jobs:
   dev:
+    if: github.event.pull_request.user.login != 'dependabot[bot]'
     uses: ./.github/workflows/tests.yml
     with:
       io: "io"

.github/workflows/link_issue.yml

@@ -6,6 +6,7 @@ on:
 
 jobs:
   check-linked-issue:
+    if: github.event.pull_request.user.login != 'dependabot[bot]'
     runs-on: ubuntu-latest
     steps:
       - name: Verify Linked Issue

.github/workflows/nb_tests.yml

@@ -13,6 +13,7 @@ env:
 
 jobs:
   run_unit_tests:
+    if: github.event.pull_request.user.login != 'dependabot[bot]'
     runs-on: ubuntu-latest
     steps:
       - name: Checkout branch

.pre-commit-config.yaml

@@ -1,28 +1,20 @@
+ci:
+  autoupdate_schedule: monthly
 repos:
-  - repo: https://github.com/python/black
-    rev: 22.3.0
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    # Ruff version.
+    rev: "v0.8.3"
     hooks:
-      - id: black-jupyter
-        args: ['--line-length=120']
-  - repo: https://github.com/PyCQA/flake8
-    rev: 4.0.1
-    hooks:
-      - id: flake8
-        args: ['--ignore=E203,W503', '--max-line-length=120']
-          #  - repo: https://github.com/PyCQA/isort
-          #    rev: 5.10.1
-          #    hooks:
-          #      - id: isort
-          #        args: ['-m3', '--tc']
+      # Run the linter and absolufy-imports.
+      - id: ruff
+        args: [--fix]
+      # Run the formatter.
+      - id: ruff-format
   - repo: https://github.com/kynan/nbstripout
     rev: 0.5.0
     hooks:
       - id: nbstripout
         args: ["--extra-keys", "metadata.colab metadata.vscode cell.metadata.colab cell.metadata.executionInfo cell.metadata.id cell.metadata.outputId", "--strip-empty-cells"]
-  - repo: https://github.com/MarcoGorelli/absolufy-imports
-    rev: v0.3.1
-    hooks:
-    -   id: absolufy-imports
   - repo: https://github.com/codespell-project/codespell
     rev: v2.1.0
     hooks: