clean \t in log

wpwupingwp · Oct 4, 2024 · b337c3b · b337c3b
1 parent 9c03f72
commit b337c3b
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Showing 2 changed files with 10 additions and 10 deletions.
diff --git a/src/OGU/evaluate.py b/src/OGU/evaluate.py
@@ -565,15 +565,15 @@ def evaluate_main(arg_str=None):
         summary, gc_array, sliding = evaluate(aln, arg)
         if summary is None:
             continue
-        log.info(f'\t{aln.stem}')
-        log.info(f'\tSamples:                   {summary.Samples}')
-        log.info(f'\tLength                     {summary.Length} bp')
-        log.info(f'\tGap ratio:                 {summary.Gap_Ratio:.8f}')
-        log.info(f'\tObserved resolution:       {summary.Observed_Res:.8f}')
-        log.info(f'\tNormalized Shannon Index:  {summary.Entropy:.8f}')
-        log.info(f'\tPi:                        {summary.Pi:.8f}')
-        log.info(f'\tPhylogenetic diversity:    {summary.PD:.8f}')
-        log.info(f'\tTree resolution:           {summary.Tree_Res:.8f}')
+        log.info(f'    {aln.stem}')
+        log.info(f'    Samples:                   {summary.Samples}')
+        log.info(f'    Length                     {summary.Length} bp')
+        log.info(f'    Gap ratio:                 {summary.Gap_Ratio:.8f}')
+        log.info(f'    Observed resolution:       {summary.Observed_Res:.8f}')
+        log.info(f'    Normalized Shannon Index:  {summary.Entropy:.8f}')
+        log.info(f'    Pi:                        {summary.Pi:.8f}')
+        log.info(f'    Phylogenetic diversity:    {summary.PD:.8f}')
+        log.info(f'    Tree resolution:           {summary.Tree_Res:.8f}')
         with open(evaluation_result, 'a', encoding='utf-8') as out:
             out.write(aln.stem + ',' + str(summary) + '\n')
         if not arg.quick:

diff --git a/src/OGU/utils.py b/src/OGU/utils.py
@@ -160,7 +160,7 @@ def init_out(arg):
     """
     if not hasattr(arg, 'out') or arg.out is None:
         log.warning('Output folder was not set.')
-        log.info('\tUse "Result" instead.')
+        log.info('  Use "Result" instead.')
         arg.out = Path().cwd().absolute() / 'Result'
     else:
         arg.out = Path(arg.out).absolute()