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Add install from scvi-tools main to workflows
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martinkim0 committed Feb 9, 2024
1 parent 42612ff commit ee1b018
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4 changes: 4 additions & 0 deletions .github/workflows/test_linux.yaml
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Expand Up @@ -42,6 +42,10 @@ jobs:
run: |
python -m pip install --upgrade pip wheel
- name: Install scvi-tools from main
run: |
pip install --no-cache-dir "scvi-tools @ git+https://github.com/scverse/scvi-tools@main"
- name: Install dependencies
run: |
pip install --pre ".[dev,test]"
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4 changes: 4 additions & 0 deletions .github/workflows/test_linux_cuda.yaml
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Expand Up @@ -46,6 +46,10 @@ jobs:
steps:
- uses: actions/checkout@v4

- name: Install scvi-tools from main
run: |
pip install --no-cache-dir "scvi-tools @ git+https://github.com/scverse/scvi-tools@main"
- name: Install dependencies
run: |
pip install ".[dev,test]"
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4 changes: 4 additions & 0 deletions .github/workflows/test_linux_pre.yaml
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Expand Up @@ -52,6 +52,10 @@ jobs:
run: |
python -m pip install --upgrade pip wheel
- name: Install scvi-tools from main
run: |
pip install --no-cache-dir "scvi-tools @ git+https://github.com/scverse/scvi-tools@main"
- name: Install dependencies
run: |
pip install --pre ".[dev,test]"
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