Skip to content
This repository has been archived by the owner on Oct 9, 2024. It is now read-only.

Normalization does not clip distances at 0 #92

Merged
merged 3 commits into from
Mar 18, 2024

Conversation

justjhong
Copy link
Collaborator

Normalization should not clip at 0, rather we are just z-scoring the distances w.r.t. the baseline dists. As a result downstream clustering results should remain the same, only with a standardized scale.

Copy link

codecov bot commented Feb 28, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 93.21%. Comparing base (ed0b8f9) to head (eb8270e).

Additional details and impacted files
@@           Coverage Diff           @@
##             main      #92   +/-   ##
=======================================
  Coverage   93.21%   93.21%           
=======================================
  Files           7        7           
  Lines         869      869           
=======================================
  Hits          810      810           
  Misses         59       59           
Files Coverage Δ
src/mrvi/_model.py 91.64% <ø> (ø)

@justjhong justjhong merged commit ae1f006 into main Mar 18, 2024
6 checks passed
@justjhong justjhong deleted the jhong/normalizationnoclip branch March 18, 2024 16:03
Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants