Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Cbioportal #11

Merged
merged 11 commits into from
Apr 3, 2024
Merged

Cbioportal #11

merged 11 commits into from
Apr 3, 2024

Conversation

jessicaw9910
Copy link
Collaborator

Description

Adding cBioPortal scripts and fixing outstanding issues.

Todos

Notable points that this PR has either accomplished or will accomplish.

  • Adding support for pulling MSKCC clinical sequencing cohort if token in ENV
  • Updated mamba-org/provision-with-micromamba@main to mamba-org/setup-micromamba@v1 to resolve CI error on Windows build

Questions

  • How to reliably access token in ENV

Status

  • In progress

Copy link

codecov bot commented Apr 2, 2024

Codecov Report

Merging #11 (d4682f7) into main (e31f53c) will decrease coverage by 0.30%.
The diff coverage is 0.00%.

Additional details and impacted files

@jessicaw9910 jessicaw9910 merged commit 1f1e326 into main Apr 3, 2024
11 checks passed
@jessicaw9910 jessicaw9910 deleted the cbioportal branch April 3, 2024 15:29
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant