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Update JGI URLs (per #7)
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glarue committed May 10, 2021
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5 changes: 3 additions & 2 deletions README.md
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# jgi-query
A command-line tool for querying and downloading from the [Joint Genome Institute (JGI)](http://genome.jgi-psf.org/) online database. Useful for accessing JGI data from command-line-only resources such as remote servers, or as a lightweight alternative to JGI's other [GUI-based download tools](http://genome.jgi-psf.org/help/download.jsf).

A command-line tool for querying and downloading from databases hosted by the [Joint Genome Institute (JGI)](https://jgi.doe.gov/). Useful for accessing JGI data from command-line-only resources such as remote servers, or as a lightweight alternative to JGI's other [GUI-based download tools](https://genome.jgi.doe.gov/portal/help/download.jsf).

### Dependencies

- A [user account with JGI](http://contacts.jgi-psf.org/registration/new) (free)
- A [user account with JGI](https://contacts.jgi.doe.gov/registration/new) (free)
- [cURL](http://curl.haxx.se/), required by the JGI download API
- [Python](https://www.python.org/downloads/) 3.x (current development) or 2.7.x (deprecated but provided -- now *significantly outdated*)

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2 changes: 1 addition & 1 deletion jgi-query.py
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Expand Up @@ -59,7 +59,7 @@ def get_user_info():
file for future use (unless you choose to delete them).
If you need to sign up for a JGI account, use the registration link at
https://signon.jgi-psf.org/signon
https://contacts.jgi.doe.gov/registration/new
=== CREDENTIALS ===
"""
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