pin libitk version for compatability

khanlab · Jan 14, 2025 · eca38ec · eca38ec
1 parent bf711af
commit eca38ec
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Showing 4 changed files with 6 additions and 5 deletions.
diff --git a/hippunfold/config/snakebids.yml b/hippunfold/config/snakebids.yml
@@ -251,7 +251,7 @@ parse_args:
       - 'laplace'
       - 'equivolume'
     default:
-      - 'equivolume'
+      - 'laplace'
     help: 'Method to use for laminar coordinates. Equivolume uses equivolumetric layering from Waehnert et al 2014 (Nighres implementation). (default: %(default)s)' 
 
   --autotop_labels:

diff --git a/hippunfold/workflow/envs/env2.yaml b/hippunfold/workflow/envs/env2.yaml
@@ -4,4 +4,5 @@ channels:
   - defaults
 dependencies:
   - python=3.9
-  - convert3d
+  - convert3d
+  - libitk=5.4.0
diff --git a/hippunfold/workflow/envs/env4.yaml b/hippunfold/workflow/envs/env4.yaml
@@ -4,5 +4,4 @@ channels:
   - defaults
 dependencies:
   - python=3.9
-  - ants=2.5.4
-  - libitk=5.4.0
+  - ants=2.5.4
diff --git a/hippunfold/workflow/envs/env7.yaml b/hippunfold/workflow/envs/env7.yaml
@@ -5,4 +5,5 @@ channels:
 dependencies:
   - python=3.9
   - niftyreg
-  - convert3d
+  - convert3d
+  - libitk=5.4.0