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Pull requests: scverse/spatialdata-io

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Pull requests list

Update xenium.py, fix problem with hidden files in morphology_foucs direcory
#260 opened Jan 13, 2025 by psl-schaefer Loading…
2
[pre-commit.ci] pre-commit autoupdate
#257 opened Jan 6, 2025 by pre-commit-ci bot Loading…
improved release process documentation, part 2
#255 opened Jan 3, 2025 by LucaMarconato Loading…
Visium HD fix bug projective transformation (CytAssist image)
#247 opened Dec 7, 2024 by LucaMarconato Loading…
1
1
resolves spatialdata_io.xenium() capability to read in xeniumranger v3.0.1.1 resegemented data
#244 opened Nov 30, 2024 by Pancreas-Pratik Loading…
1
2
Add CLI for spatialdata_io.
#239 opened Nov 14, 2024 by migueLib Loading…
1
14
Add universal image loader
#234 opened Nov 5, 2024 by minhtien-trinh Loading…
1
Add reader for DIA-NN output
#233 opened Nov 5, 2024 by minhtien-trinh Loading…
1
Reduce reader memory consumption
#228 opened Oct 28, 2024 by marcovarrone • Draft
2
extract shape of full-resolution image, estimate visium pixel size
#219 opened Oct 10, 2024 by ghaith-mq • Draft
1
adjusted docstrings in steinbock reader py file
#165 opened Jun 27, 2024 by LukasHats • Draft
CosMX reader with stitching
#137 opened Apr 17, 2024 by quentinblampey • Draft
5 tasks
Added first simple version of CLI script.
#72 opened Jul 21, 2023 by FloWuenne • Draft
1 of 2 tasks
2
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